Gene : Potri.006G052700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  538
Name:  ? Potri.006G052700 Secondary Identifier:  ? PAC:37242830
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G052700 0.5kb upstream 0.5kb upstream 4370 true Chr06: 3778059-3782428 Populus trichocarpa
Potri.006G052700 0.5kb upstream 0.5kb upstream 500 false Chr06: 3781929-3782428 Populus trichocarpa
Potri.006G052700 0.5kb downstream 0.5kb downstream 4370 true Chr06: 3777559-3781928 Populus trichocarpa
Potri.006G052700 0.5kb downstream 0.5kb downstream 500 false Chr06: 3777559-3778058 Populus trichocarpa
Potri.006G052700 1.0kb upstream 1.0kb upstream 4870 true Chr06: 3778059-3782928 Populus trichocarpa
Potri.006G052700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3781929-3782928 Populus trichocarpa
Potri.006G052700 1.0kb downstream 1.0kb downstream 4870 true Chr06: 3777059-3781928 Populus trichocarpa
Potri.006G052700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3777059-3778058 Populus trichocarpa
Potri.006G052700 2.0kb upstream 2.0kb upstream 5870 true Chr06: 3778059-3783928 Populus trichocarpa
Potri.006G052700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3781929-3783928 Populus trichocarpa
Potri.006G052700 2.0kb downstream 2.0kb downstream 5870 true Chr06: 3776059-3781928 Populus trichocarpa
Potri.006G052700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3776059-3778058 Populus trichocarpa
Potri.006G052700 5.0kb upstream 5.0kb upstream 8870 true Chr06: 3778059-3786928 Populus trichocarpa
Potri.006G052700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3781929-3786928 Populus trichocarpa
Potri.006G052700 5.0kb downstream 5.0kb downstream 8870 true Chr06: 3773059-3781928 Populus trichocarpa
Potri.006G052700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3773059-3778058 Populus trichocarpa
Potri.006G052700 10.0kb upstream 10.0kb upstream 13870 true Chr06: 3778059-3791928 Populus trichocarpa
Potri.006G052700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3781929-3791928 Populus trichocarpa
Potri.006G052700 10.0kb downstream 10.0kb downstream 13870 true Chr06: 3768059-3781928 Populus trichocarpa
Potri.006G052700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3768059-3778058 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453826 5262 Malpighiales View MSA
124251426 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain