Gene : Potri.006G046500 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR24093:SF296 - CALCIUM-TRANSPORTING ATPASE 4, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  473
Name:  ? Potri.006G046500 Secondary Identifier:  ? PAC:37245266
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G046500 0.5kb upstream 0.5kb upstream 10436 true Chr06: 3290215-3300650 Populus trichocarpa
Potri.006G046500 0.5kb upstream 0.5kb upstream 500 false Chr06: 3290215-3290714 Populus trichocarpa
Potri.006G046500 0.5kb downstream 0.5kb downstream 10436 true Chr06: 3290715-3301150 Populus trichocarpa
Potri.006G046500 0.5kb downstream 0.5kb downstream 500 false Chr06: 3300651-3301150 Populus trichocarpa
Potri.006G046500 1.0kb upstream 1.0kb upstream 10936 true Chr06: 3289715-3300650 Populus trichocarpa
Potri.006G046500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3289715-3290714 Populus trichocarpa
Potri.006G046500 1.0kb downstream 1.0kb downstream 10936 true Chr06: 3290715-3301650 Populus trichocarpa
Potri.006G046500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3300651-3301650 Populus trichocarpa
Potri.006G046500 2.0kb upstream 2.0kb upstream 11936 true Chr06: 3288715-3300650 Populus trichocarpa
Potri.006G046500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3288715-3290714 Populus trichocarpa
Potri.006G046500 2.0kb downstream 2.0kb downstream 11936 true Chr06: 3290715-3302650 Populus trichocarpa
Potri.006G046500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3300651-3302650 Populus trichocarpa
Potri.006G046500 5.0kb upstream 5.0kb upstream 14936 true Chr06: 3285715-3300650 Populus trichocarpa
Potri.006G046500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3285715-3290714 Populus trichocarpa
Potri.006G046500 5.0kb downstream 5.0kb downstream 14936 true Chr06: 3290715-3305650 Populus trichocarpa
Potri.006G046500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3300651-3305650 Populus trichocarpa
Potri.006G046500 10.0kb upstream 10.0kb upstream 19936 true Chr06: 3280715-3300650 Populus trichocarpa
Potri.006G046500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3280715-3290714 Populus trichocarpa
Potri.006G046500 10.0kb downstream 10.0kb downstream 19936 true Chr06: 3290715-3310650 Populus trichocarpa
Potri.006G046500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3300651-3310650 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450425 5262 Malpighiales View MSA
124244761 5268 Malvidae View MSA
124070043 5270 Rosid View MSA
123738336 5271 Pentapetalae View MSA
122786540 5272 Eudicot View MSA
122043191 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain