Gene : Potri.006G141400 P. trichocarpa v3.1

Defline:  (1 of 14) 1.14.13.21 - Flavonoid 3'-monooxygenase / Flavonoid 3'-hydroxylase Genomic Order:  1452
Name:  ? Potri.006G141400 Secondary Identifier:  ? PAC:37246105

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY1F-823 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3101 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5060 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5152 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G141400 0.5kb upstream 0.5kb upstream 3098 true Chr06: 11926085-11929182 Populus trichocarpa
Potri.006G141400 0.5kb upstream 0.5kb upstream 500 false Chr06: 11926085-11926584 Populus trichocarpa
Potri.006G141400 0.5kb downstream 0.5kb downstream 3098 true Chr06: 11926585-11929682 Populus trichocarpa
Potri.006G141400 0.5kb downstream 0.5kb downstream 500 false Chr06: 11929183-11929682 Populus trichocarpa
Potri.006G141400 1.0kb upstream 1.0kb upstream 3598 true Chr06: 11925585-11929182 Populus trichocarpa
Potri.006G141400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11925585-11926584 Populus trichocarpa
Potri.006G141400 1.0kb downstream 1.0kb downstream 3598 true Chr06: 11926585-11930182 Populus trichocarpa
Potri.006G141400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11929183-11930182 Populus trichocarpa
Potri.006G141400 2.0kb upstream 2.0kb upstream 4598 true Chr06: 11924585-11929182 Populus trichocarpa
Potri.006G141400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11924585-11926584 Populus trichocarpa
Potri.006G141400 2.0kb downstream 2.0kb downstream 4598 true Chr06: 11926585-11931182 Populus trichocarpa
Potri.006G141400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11929183-11931182 Populus trichocarpa
Potri.006G141400 5.0kb upstream 5.0kb upstream 7598 true Chr06: 11921585-11929182 Populus trichocarpa
Potri.006G141400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11921585-11926584 Populus trichocarpa
Potri.006G141400 5.0kb downstream 5.0kb downstream 7598 true Chr06: 11926585-11934182 Populus trichocarpa
Potri.006G141400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11929183-11934182 Populus trichocarpa
Potri.006G141400 10.0kb upstream 10.0kb upstream 12598 true Chr06: 11916585-11929182 Populus trichocarpa
Potri.006G141400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11916585-11926584 Populus trichocarpa
Potri.006G141400 10.0kb downstream 10.0kb downstream 12598 true Chr06: 11926585-11939182 Populus trichocarpa
Potri.006G141400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11929183-11939182 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459934 5262 Malpighiales View MSA
124246845 5268 Malvidae View MSA
124071984 5270 Rosid View MSA
123753669 5271 Pentapetalae View MSA
122797866 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain