Gene : Potri.006G117400 P. trichocarpa v3.1

Defline:  (1 of 4) PTHR11817//PTHR11817:SF33 - PYRUVATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1203
Name:  ? Potri.006G117400 Secondary Identifier:  ? PAC:37242236

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G117400 0.5kb upstream 0.5kb upstream 7822 true Chr06: 9234046-9241867 Populus trichocarpa
Potri.006G117400 0.5kb upstream 0.5kb upstream 500 false Chr06: 9234046-9234545 Populus trichocarpa
Potri.006G117400 0.5kb downstream 0.5kb downstream 7822 true Chr06: 9234546-9242367 Populus trichocarpa
Potri.006G117400 0.5kb downstream 0.5kb downstream 500 false Chr06: 9241868-9242367 Populus trichocarpa
Potri.006G117400 1.0kb upstream 1.0kb upstream 8322 true Chr06: 9233546-9241867 Populus trichocarpa
Potri.006G117400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9233546-9234545 Populus trichocarpa
Potri.006G117400 1.0kb downstream 1.0kb downstream 8322 true Chr06: 9234546-9242867 Populus trichocarpa
Potri.006G117400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9241868-9242867 Populus trichocarpa
Potri.006G117400 2.0kb upstream 2.0kb upstream 9322 true Chr06: 9232546-9241867 Populus trichocarpa
Potri.006G117400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9232546-9234545 Populus trichocarpa
Potri.006G117400 2.0kb downstream 2.0kb downstream 9322 true Chr06: 9234546-9243867 Populus trichocarpa
Potri.006G117400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9241868-9243867 Populus trichocarpa
Potri.006G117400 5.0kb upstream 5.0kb upstream 12322 true Chr06: 9229546-9241867 Populus trichocarpa
Potri.006G117400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9229546-9234545 Populus trichocarpa
Potri.006G117400 5.0kb downstream 5.0kb downstream 12322 true Chr06: 9234546-9246867 Populus trichocarpa
Potri.006G117400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9241868-9246867 Populus trichocarpa
Potri.006G117400 10.0kb upstream 10.0kb upstream 17322 true Chr06: 9224546-9241867 Populus trichocarpa
Potri.006G117400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9224546-9234545 Populus trichocarpa
Potri.006G117400 10.0kb downstream 10.0kb downstream 17322 true Chr06: 9234546-9251867 Populus trichocarpa
Potri.006G117400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9241868-9251867 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455734 5262 Malpighiales View MSA
124237708 5268 Malvidae View MSA
124072405 5270 Rosid View MSA
123746399 5271 Pentapetalae View MSA
122796515 5272 Eudicot View MSA
122046004 5273 Angiosperm View MSA
121344818 5274 Embryophyte View MSA
123427832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain