Gene : Potri.006G202600 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  2085
Name:  ? Potri.006G202600 Secondary Identifier:  ? PAC:37242013
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G202600 0.5kb upstream 0.5kb upstream 2185 true Chr06: 21744980-21747164 Populus trichocarpa
Potri.006G202600 0.5kb upstream 0.5kb upstream 500 false Chr06: 21746665-21747164 Populus trichocarpa
Potri.006G202600 0.5kb downstream 0.5kb downstream 2185 true Chr06: 21744480-21746664 Populus trichocarpa
Potri.006G202600 0.5kb downstream 0.5kb downstream 500 false Chr06: 21744480-21744979 Populus trichocarpa
Potri.006G202600 1.0kb upstream 1.0kb upstream 2685 true Chr06: 21744980-21747664 Populus trichocarpa
Potri.006G202600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21746665-21747664 Populus trichocarpa
Potri.006G202600 1.0kb downstream 1.0kb downstream 2685 true Chr06: 21743980-21746664 Populus trichocarpa
Potri.006G202600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21743980-21744979 Populus trichocarpa
Potri.006G202600 2.0kb upstream 2.0kb upstream 3685 true Chr06: 21744980-21748664 Populus trichocarpa
Potri.006G202600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21746665-21748664 Populus trichocarpa
Potri.006G202600 2.0kb downstream 2.0kb downstream 3685 true Chr06: 21742980-21746664 Populus trichocarpa
Potri.006G202600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21742980-21744979 Populus trichocarpa
Potri.006G202600 5.0kb upstream 5.0kb upstream 6685 true Chr06: 21744980-21751664 Populus trichocarpa
Potri.006G202600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21746665-21751664 Populus trichocarpa
Potri.006G202600 5.0kb downstream 5.0kb downstream 6685 true Chr06: 21739980-21746664 Populus trichocarpa
Potri.006G202600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21739980-21744979 Populus trichocarpa
Potri.006G202600 10.0kb upstream 10.0kb upstream 11685 true Chr06: 21744980-21756664 Populus trichocarpa
Potri.006G202600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21746665-21756664 Populus trichocarpa
Potri.006G202600 10.0kb downstream 10.0kb downstream 11685 true Chr06: 21734980-21746664 Populus trichocarpa
Potri.006G202600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21734980-21744979 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458557 5262 Malpighiales View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain