Gene : Potri.006G208800 P. trichocarpa v3.1
Defline:  (1 of 6) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  2148
Name:  ? Potri.006G208800 Secondary Identifier:  ? PAC:37246031
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G208800 0.5kb upstream 0.5kb upstream 1394 true Chr06: 22394636-22396029 Populus trichocarpa
Potri.006G208800 0.5kb upstream 0.5kb upstream 500 false Chr06: 22395530-22396029 Populus trichocarpa
Potri.006G208800 0.5kb downstream 0.5kb downstream 1394 true Chr06: 22394136-22395529 Populus trichocarpa
Potri.006G208800 0.5kb downstream 0.5kb downstream 500 false Chr06: 22394136-22394635 Populus trichocarpa
Potri.006G208800 1.0kb upstream 1.0kb upstream 1894 true Chr06: 22394636-22396529 Populus trichocarpa
Potri.006G208800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22395530-22396529 Populus trichocarpa
Potri.006G208800 1.0kb downstream 1.0kb downstream 1894 true Chr06: 22393636-22395529 Populus trichocarpa
Potri.006G208800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22393636-22394635 Populus trichocarpa
Potri.006G208800 2.0kb upstream 2.0kb upstream 2894 true Chr06: 22394636-22397529 Populus trichocarpa
Potri.006G208800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22395530-22397529 Populus trichocarpa
Potri.006G208800 2.0kb downstream 2.0kb downstream 2894 true Chr06: 22392636-22395529 Populus trichocarpa
Potri.006G208800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22392636-22394635 Populus trichocarpa
Potri.006G208800 5.0kb upstream 5.0kb upstream 5894 true Chr06: 22394636-22400529 Populus trichocarpa
Potri.006G208800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22395530-22400529 Populus trichocarpa
Potri.006G208800 5.0kb downstream 5.0kb downstream 5894 true Chr06: 22389636-22395529 Populus trichocarpa
Potri.006G208800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22389636-22394635 Populus trichocarpa
Potri.006G208800 10.0kb upstream 10.0kb upstream 10894 true Chr06: 22394636-22405529 Populus trichocarpa
Potri.006G208800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22395530-22405529 Populus trichocarpa
Potri.006G208800 10.0kb downstream 10.0kb downstream 10894 true Chr06: 22384636-22395529 Populus trichocarpa
Potri.006G208800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22384636-22394635 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464428 5262 Malpighiales View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain