Gene : Potri.006G175300 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10906:SF9 - PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  1803
Name:  ? Potri.006G175300 Secondary Identifier:  ? PAC:37246249
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G175300 0.5kb upstream 0.5kb upstream 9265 true Chr06: 18773948-18783212 Populus trichocarpa
Potri.006G175300 0.5kb upstream 0.5kb upstream 500 false Chr06: 18773948-18774447 Populus trichocarpa
Potri.006G175300 0.5kb downstream 0.5kb downstream 9265 true Chr06: 18774448-18783712 Populus trichocarpa
Potri.006G175300 0.5kb downstream 0.5kb downstream 500 false Chr06: 18783213-18783712 Populus trichocarpa
Potri.006G175300 1.0kb upstream 1.0kb upstream 9765 true Chr06: 18773448-18783212 Populus trichocarpa
Potri.006G175300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18773448-18774447 Populus trichocarpa
Potri.006G175300 1.0kb downstream 1.0kb downstream 9765 true Chr06: 18774448-18784212 Populus trichocarpa
Potri.006G175300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18783213-18784212 Populus trichocarpa
Potri.006G175300 2.0kb upstream 2.0kb upstream 10765 true Chr06: 18772448-18783212 Populus trichocarpa
Potri.006G175300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18772448-18774447 Populus trichocarpa
Potri.006G175300 2.0kb downstream 2.0kb downstream 10765 true Chr06: 18774448-18785212 Populus trichocarpa
Potri.006G175300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18783213-18785212 Populus trichocarpa
Potri.006G175300 5.0kb upstream 5.0kb upstream 13765 true Chr06: 18769448-18783212 Populus trichocarpa
Potri.006G175300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18769448-18774447 Populus trichocarpa
Potri.006G175300 5.0kb downstream 5.0kb downstream 13765 true Chr06: 18774448-18788212 Populus trichocarpa
Potri.006G175300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18783213-18788212 Populus trichocarpa
Potri.006G175300 10.0kb upstream 10.0kb upstream 18765 true Chr06: 18764448-18783212 Populus trichocarpa
Potri.006G175300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18764448-18774447 Populus trichocarpa
Potri.006G175300 10.0kb downstream 10.0kb downstream 18765 true Chr06: 18774448-18793212 Populus trichocarpa
Potri.006G175300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18783213-18793212 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450041 5262 Malpighiales View MSA
124241538 5268 Malvidae View MSA
124063230 5270 Rosid View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain