Gene : Potri.006G166200 P. trichocarpa v3.1
Defline:  (1 of 5) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  1707
Name:  ? Potri.006G166200 Secondary Identifier:  ? PAC:37244742
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G166200 0.5kb upstream 0.5kb upstream 4988 true Chr06: 16888744-16893731 Populus trichocarpa
Potri.006G166200 0.5kb upstream 0.5kb upstream 500 false Chr06: 16888744-16889243 Populus trichocarpa
Potri.006G166200 0.5kb downstream 0.5kb downstream 4988 true Chr06: 16889244-16894231 Populus trichocarpa
Potri.006G166200 0.5kb downstream 0.5kb downstream 500 false Chr06: 16893732-16894231 Populus trichocarpa
Potri.006G166200 1.0kb upstream 1.0kb upstream 5488 true Chr06: 16888244-16893731 Populus trichocarpa
Potri.006G166200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16888244-16889243 Populus trichocarpa
Potri.006G166200 1.0kb downstream 1.0kb downstream 5488 true Chr06: 16889244-16894731 Populus trichocarpa
Potri.006G166200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16893732-16894731 Populus trichocarpa
Potri.006G166200 2.0kb upstream 2.0kb upstream 6488 true Chr06: 16887244-16893731 Populus trichocarpa
Potri.006G166200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16887244-16889243 Populus trichocarpa
Potri.006G166200 2.0kb downstream 2.0kb downstream 6488 true Chr06: 16889244-16895731 Populus trichocarpa
Potri.006G166200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16893732-16895731 Populus trichocarpa
Potri.006G166200 5.0kb upstream 5.0kb upstream 9488 true Chr06: 16884244-16893731 Populus trichocarpa
Potri.006G166200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16884244-16889243 Populus trichocarpa
Potri.006G166200 5.0kb downstream 5.0kb downstream 9488 true Chr06: 16889244-16898731 Populus trichocarpa
Potri.006G166200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16893732-16898731 Populus trichocarpa
Potri.006G166200 10.0kb upstream 10.0kb upstream 14488 true Chr06: 16879244-16893731 Populus trichocarpa
Potri.006G166200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16879244-16889243 Populus trichocarpa
Potri.006G166200 10.0kb downstream 10.0kb downstream 14488 true Chr06: 16889244-16903731 Populus trichocarpa
Potri.006G166200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16893732-16903731 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459103 5262 Malpighiales View MSA
124238988 5268 Malvidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain