Gene : Potri.006G252400 P. trichocarpa v3.1
Defline:  (1 of 1) PF12854//PF13041//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2600
Name:  ? Potri.006G252400 Secondary Identifier:  ? PAC:37241872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G252400 0.5kb upstream 0.5kb upstream 2893 true Chr06: 25790713-25793605 Populus trichocarpa
Potri.006G252400 0.5kb upstream 0.5kb upstream 500 false Chr06: 25790713-25791212 Populus trichocarpa
Potri.006G252400 0.5kb downstream 0.5kb downstream 2893 true Chr06: 25791213-25794105 Populus trichocarpa
Potri.006G252400 0.5kb downstream 0.5kb downstream 500 false Chr06: 25793606-25794105 Populus trichocarpa
Potri.006G252400 1.0kb upstream 1.0kb upstream 3393 true Chr06: 25790213-25793605 Populus trichocarpa
Potri.006G252400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25790213-25791212 Populus trichocarpa
Potri.006G252400 1.0kb downstream 1.0kb downstream 3393 true Chr06: 25791213-25794605 Populus trichocarpa
Potri.006G252400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25793606-25794605 Populus trichocarpa
Potri.006G252400 2.0kb upstream 2.0kb upstream 4393 true Chr06: 25789213-25793605 Populus trichocarpa
Potri.006G252400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25789213-25791212 Populus trichocarpa
Potri.006G252400 2.0kb downstream 2.0kb downstream 4393 true Chr06: 25791213-25795605 Populus trichocarpa
Potri.006G252400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25793606-25795605 Populus trichocarpa
Potri.006G252400 5.0kb upstream 5.0kb upstream 7393 true Chr06: 25786213-25793605 Populus trichocarpa
Potri.006G252400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25786213-25791212 Populus trichocarpa
Potri.006G252400 5.0kb downstream 5.0kb downstream 7393 true Chr06: 25791213-25798605 Populus trichocarpa
Potri.006G252400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25793606-25798605 Populus trichocarpa
Potri.006G252400 10.0kb upstream 10.0kb upstream 12393 true Chr06: 25781213-25793605 Populus trichocarpa
Potri.006G252400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25781213-25791212 Populus trichocarpa
Potri.006G252400 10.0kb downstream 10.0kb downstream 12393 true Chr06: 25791213-25803605 Populus trichocarpa
Potri.006G252400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25793606-25803605 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460548 5262 Malpighiales View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain