Gene : Potri.007G015700 P. trichocarpa v3.1

Defline:  (1 of 56) K01051 - pectinesterase (E3.1.1.11) Genomic Order:  160
Name:  ? Potri.007G015700 Secondary Identifier:  ? PAC:37251877

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G015700 0.5kb upstream 0.5kb upstream 3001 true Chr07: 1162022-1165022 Populus trichocarpa
Potri.007G015700 0.5kb upstream 0.5kb upstream 500 false Chr07: 1162022-1162521 Populus trichocarpa
Potri.007G015700 0.5kb downstream 0.5kb downstream 3001 true Chr07: 1162522-1165522 Populus trichocarpa
Potri.007G015700 0.5kb downstream 0.5kb downstream 500 false Chr07: 1165023-1165522 Populus trichocarpa
Potri.007G015700 1.0kb upstream 1.0kb upstream 3501 true Chr07: 1161522-1165022 Populus trichocarpa
Potri.007G015700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1161522-1162521 Populus trichocarpa
Potri.007G015700 1.0kb downstream 1.0kb downstream 3501 true Chr07: 1162522-1166022 Populus trichocarpa
Potri.007G015700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1165023-1166022 Populus trichocarpa
Potri.007G015700 2.0kb upstream 2.0kb upstream 4501 true Chr07: 1160522-1165022 Populus trichocarpa
Potri.007G015700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1160522-1162521 Populus trichocarpa
Potri.007G015700 2.0kb downstream 2.0kb downstream 4501 true Chr07: 1162522-1167022 Populus trichocarpa
Potri.007G015700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1165023-1167022 Populus trichocarpa
Potri.007G015700 5.0kb upstream 5.0kb upstream 7501 true Chr07: 1157522-1165022 Populus trichocarpa
Potri.007G015700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1157522-1162521 Populus trichocarpa
Potri.007G015700 5.0kb downstream 5.0kb downstream 7501 true Chr07: 1162522-1170022 Populus trichocarpa
Potri.007G015700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1165023-1170022 Populus trichocarpa
Potri.007G015700 10.0kb upstream 10.0kb upstream 12501 true Chr07: 1152522-1165022 Populus trichocarpa
Potri.007G015700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1152522-1162521 Populus trichocarpa
Potri.007G015700 10.0kb downstream 10.0kb downstream 12501 true Chr07: 1162522-1175022 Populus trichocarpa
Potri.007G015700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1165023-1175022 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453950 5262 Malpighiales View MSA
124246472 5268 Malvidae View MSA
124072130 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain