Gene : Potri.008G002400 P. trichocarpa v3.1

Defline:  (1 of 2) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  26
Name:  ? Potri.008G002400 Secondary Identifier:  ? PAC:37271006

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G002400 0.5kb upstream 0.5kb upstream 4909 true Chr08: 127719-132627 Populus trichocarpa
Potri.008G002400 0.5kb upstream 0.5kb upstream 500 false Chr08: 127719-128218 Populus trichocarpa
Potri.008G002400 0.5kb downstream 0.5kb downstream 4909 true Chr08: 128219-133127 Populus trichocarpa
Potri.008G002400 0.5kb downstream 0.5kb downstream 500 false Chr08: 132628-133127 Populus trichocarpa
Potri.008G002400 1.0kb upstream 1.0kb upstream 5409 true Chr08: 127219-132627 Populus trichocarpa
Potri.008G002400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 127219-128218 Populus trichocarpa
Potri.008G002400 1.0kb downstream 1.0kb downstream 5409 true Chr08: 128219-133627 Populus trichocarpa
Potri.008G002400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 132628-133627 Populus trichocarpa
Potri.008G002400 2.0kb upstream 2.0kb upstream 6409 true Chr08: 126219-132627 Populus trichocarpa
Potri.008G002400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 126219-128218 Populus trichocarpa
Potri.008G002400 2.0kb downstream 2.0kb downstream 6409 true Chr08: 128219-134627 Populus trichocarpa
Potri.008G002400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 132628-134627 Populus trichocarpa
Potri.008G002400 5.0kb upstream 5.0kb upstream 9409 true Chr08: 123219-132627 Populus trichocarpa
Potri.008G002400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 123219-128218 Populus trichocarpa
Potri.008G002400 5.0kb downstream 5.0kb downstream 9409 true Chr08: 128219-137627 Populus trichocarpa
Potri.008G002400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 132628-137627 Populus trichocarpa
Potri.008G002400 10.0kb upstream 10.0kb upstream 14409 true Chr08: 118219-132627 Populus trichocarpa
Potri.008G002400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 118219-128218 Populus trichocarpa
Potri.008G002400 10.0kb downstream 10.0kb downstream 14409 true Chr08: 128219-142627 Populus trichocarpa
Potri.008G002400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 132628-142627 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124242443 5268 Malvidae View MSA
122452759 5262 Malpighiales View MSA
124065394 5270 Rosid View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain