Gene : Potri.007G135500 P. trichocarpa v3.1
Defline:  (1 of 2) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  1394
Name:  ? Potri.007G135500 Secondary Identifier:  ? PAC:37251919
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G135500 0.5kb upstream 0.5kb upstream 13778 true Chr07: 14845335-14859112 Populus trichocarpa
Potri.007G135500 0.5kb upstream 0.5kb upstream 500 false Chr07: 14845335-14845834 Populus trichocarpa
Potri.007G135500 0.5kb downstream 0.5kb downstream 13778 true Chr07: 14845835-14859612 Populus trichocarpa
Potri.007G135500 0.5kb downstream 0.5kb downstream 500 false Chr07: 14859113-14859612 Populus trichocarpa
Potri.007G135500 1.0kb upstream 1.0kb upstream 14278 true Chr07: 14844835-14859112 Populus trichocarpa
Potri.007G135500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14844835-14845834 Populus trichocarpa
Potri.007G135500 1.0kb downstream 1.0kb downstream 14278 true Chr07: 14845835-14860112 Populus trichocarpa
Potri.007G135500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14859113-14860112 Populus trichocarpa
Potri.007G135500 2.0kb upstream 2.0kb upstream 15278 true Chr07: 14843835-14859112 Populus trichocarpa
Potri.007G135500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14843835-14845834 Populus trichocarpa
Potri.007G135500 2.0kb downstream 2.0kb downstream 15278 true Chr07: 14845835-14861112 Populus trichocarpa
Potri.007G135500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14859113-14861112 Populus trichocarpa
Potri.007G135500 5.0kb upstream 5.0kb upstream 18278 true Chr07: 14840835-14859112 Populus trichocarpa
Potri.007G135500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14840835-14845834 Populus trichocarpa
Potri.007G135500 5.0kb downstream 5.0kb downstream 18278 true Chr07: 14845835-14864112 Populus trichocarpa
Potri.007G135500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14859113-14864112 Populus trichocarpa
Potri.007G135500 10.0kb upstream 10.0kb upstream 23278 true Chr07: 14835835-14859112 Populus trichocarpa
Potri.007G135500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14835835-14845834 Populus trichocarpa
Potri.007G135500 10.0kb downstream 10.0kb downstream 23278 true Chr07: 14845835-14869112 Populus trichocarpa
Potri.007G135500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14859113-14869112 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455540 5262 Malpighiales View MSA
124244144 5268 Malvidae View MSA
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain