Gene : Potri.008G068800 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  711
Name:  ? Potri.008G068800 Secondary Identifier:  ? PAC:37272518

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G068800 0.5kb upstream 0.5kb upstream 3898 true Chr08: 4189096-4192993 Populus trichocarpa
Potri.008G068800 0.5kb upstream 0.5kb upstream 500 false Chr08: 4192494-4192993 Populus trichocarpa
Potri.008G068800 0.5kb downstream 0.5kb downstream 3898 true Chr08: 4188596-4192493 Populus trichocarpa
Potri.008G068800 0.5kb downstream 0.5kb downstream 500 false Chr08: 4188596-4189095 Populus trichocarpa
Potri.008G068800 1.0kb upstream 1.0kb upstream 4398 true Chr08: 4189096-4193493 Populus trichocarpa
Potri.008G068800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4192494-4193493 Populus trichocarpa
Potri.008G068800 1.0kb downstream 1.0kb downstream 4398 true Chr08: 4188096-4192493 Populus trichocarpa
Potri.008G068800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4188096-4189095 Populus trichocarpa
Potri.008G068800 2.0kb upstream 2.0kb upstream 5398 true Chr08: 4189096-4194493 Populus trichocarpa
Potri.008G068800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4192494-4194493 Populus trichocarpa
Potri.008G068800 2.0kb downstream 2.0kb downstream 5398 true Chr08: 4187096-4192493 Populus trichocarpa
Potri.008G068800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4187096-4189095 Populus trichocarpa
Potri.008G068800 5.0kb upstream 5.0kb upstream 8398 true Chr08: 4189096-4197493 Populus trichocarpa
Potri.008G068800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4192494-4197493 Populus trichocarpa
Potri.008G068800 5.0kb downstream 5.0kb downstream 8398 true Chr08: 4184096-4192493 Populus trichocarpa
Potri.008G068800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4184096-4189095 Populus trichocarpa
Potri.008G068800 10.0kb upstream 10.0kb upstream 13398 true Chr08: 4189096-4202493 Populus trichocarpa
Potri.008G068800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4192494-4202493 Populus trichocarpa
Potri.008G068800 10.0kb downstream 10.0kb downstream 13398 true Chr08: 4179096-4192493 Populus trichocarpa
Potri.008G068800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4179096-4189095 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122412476 5262 Malpighiales View MSA
124206610 5268 Malvidae View MSA
123925496 5270 Rosid View MSA
123505447 5271 Pentapetalae View MSA
122540548 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain