Gene : Potri.008G030100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10044:SF127 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  312
Name:  ? Potri.008G030100 Secondary Identifier:  ? PAC:37271535
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G030100 0.5kb upstream 0.5kb upstream 6711 true Chr08: 1655254-1661964 Populus trichocarpa
Potri.008G030100 0.5kb upstream 0.5kb upstream 500 false Chr08: 1661465-1661964 Populus trichocarpa
Potri.008G030100 0.5kb downstream 0.5kb downstream 6711 true Chr08: 1654754-1661464 Populus trichocarpa
Potri.008G030100 0.5kb downstream 0.5kb downstream 500 false Chr08: 1654754-1655253 Populus trichocarpa
Potri.008G030100 1.0kb upstream 1.0kb upstream 7211 true Chr08: 1655254-1662464 Populus trichocarpa
Potri.008G030100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1661465-1662464 Populus trichocarpa
Potri.008G030100 1.0kb downstream 1.0kb downstream 7211 true Chr08: 1654254-1661464 Populus trichocarpa
Potri.008G030100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1654254-1655253 Populus trichocarpa
Potri.008G030100 2.0kb upstream 2.0kb upstream 8211 true Chr08: 1655254-1663464 Populus trichocarpa
Potri.008G030100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1661465-1663464 Populus trichocarpa
Potri.008G030100 2.0kb downstream 2.0kb downstream 8211 true Chr08: 1653254-1661464 Populus trichocarpa
Potri.008G030100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1653254-1655253 Populus trichocarpa
Potri.008G030100 5.0kb upstream 5.0kb upstream 11211 true Chr08: 1655254-1666464 Populus trichocarpa
Potri.008G030100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1661465-1666464 Populus trichocarpa
Potri.008G030100 5.0kb downstream 5.0kb downstream 11211 true Chr08: 1650254-1661464 Populus trichocarpa
Potri.008G030100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1650254-1655253 Populus trichocarpa
Potri.008G030100 10.0kb upstream 10.0kb upstream 16211 true Chr08: 1655254-1671464 Populus trichocarpa
Potri.008G030100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1661465-1671464 Populus trichocarpa
Potri.008G030100 10.0kb downstream 10.0kb downstream 16211 true Chr08: 1645254-1661464 Populus trichocarpa
Potri.008G030100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1645254-1655253 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454500 5262 Malpighiales View MSA
124245236 5268 Malvidae View MSA
124065463 5270 Rosid View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain