Gene : Potri.008G100500 P. trichocarpa v3.1
Defline:  (1 of 80) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1042
Name:  ? Potri.008G100500 Secondary Identifier:  ? PAC:37271659
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G100500 0.5kb upstream 0.5kb upstream 3354 true Chr08: 6291327-6294680 Populus trichocarpa
Potri.008G100500 0.5kb upstream 0.5kb upstream 500 false Chr08: 6294181-6294680 Populus trichocarpa
Potri.008G100500 0.5kb downstream 0.5kb downstream 3354 true Chr08: 6290827-6294180 Populus trichocarpa
Potri.008G100500 0.5kb downstream 0.5kb downstream 500 false Chr08: 6290827-6291326 Populus trichocarpa
Potri.008G100500 1.0kb upstream 1.0kb upstream 3854 true Chr08: 6291327-6295180 Populus trichocarpa
Potri.008G100500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6294181-6295180 Populus trichocarpa
Potri.008G100500 1.0kb downstream 1.0kb downstream 3854 true Chr08: 6290327-6294180 Populus trichocarpa
Potri.008G100500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6290327-6291326 Populus trichocarpa
Potri.008G100500 2.0kb upstream 2.0kb upstream 4854 true Chr08: 6291327-6296180 Populus trichocarpa
Potri.008G100500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6294181-6296180 Populus trichocarpa
Potri.008G100500 2.0kb downstream 2.0kb downstream 4854 true Chr08: 6289327-6294180 Populus trichocarpa
Potri.008G100500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6289327-6291326 Populus trichocarpa
Potri.008G100500 5.0kb upstream 5.0kb upstream 7854 true Chr08: 6291327-6299180 Populus trichocarpa
Potri.008G100500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6294181-6299180 Populus trichocarpa
Potri.008G100500 5.0kb downstream 5.0kb downstream 7854 true Chr08: 6286327-6294180 Populus trichocarpa
Potri.008G100500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6286327-6291326 Populus trichocarpa
Potri.008G100500 10.0kb upstream 10.0kb upstream 12854 true Chr08: 6291327-6304180 Populus trichocarpa
Potri.008G100500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6294181-6304180 Populus trichocarpa
Potri.008G100500 10.0kb downstream 10.0kb downstream 12854 true Chr08: 6281327-6294180 Populus trichocarpa
Potri.008G100500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6281327-6291326 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451982 5262 Malpighiales View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain