Gene : Potri.008G100800 P. trichocarpa v3.1

Defline:  (1 of 3) K00382 - dihydrolipoamide dehydrogenase (DLD, lpd, pdhD) Genomic Order:  1045
Name:  ? Potri.008G100800 Secondary Identifier:  ? PAC:37272248

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYCLEAV-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5046 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5084 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5173 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PYRUVDEHYD-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G100800 0.5kb upstream 0.5kb upstream 3432 true Chr08: 6351268-6354699 Populus trichocarpa
Potri.008G100800 0.5kb upstream 0.5kb upstream 500 false Chr08: 6351268-6351767 Populus trichocarpa
Potri.008G100800 0.5kb downstream 0.5kb downstream 3432 true Chr08: 6351768-6355199 Populus trichocarpa
Potri.008G100800 0.5kb downstream 0.5kb downstream 500 false Chr08: 6354700-6355199 Populus trichocarpa
Potri.008G100800 1.0kb upstream 1.0kb upstream 3932 true Chr08: 6350768-6354699 Populus trichocarpa
Potri.008G100800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6350768-6351767 Populus trichocarpa
Potri.008G100800 1.0kb downstream 1.0kb downstream 3932 true Chr08: 6351768-6355699 Populus trichocarpa
Potri.008G100800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6354700-6355699 Populus trichocarpa
Potri.008G100800 2.0kb upstream 2.0kb upstream 4932 true Chr08: 6349768-6354699 Populus trichocarpa
Potri.008G100800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6349768-6351767 Populus trichocarpa
Potri.008G100800 2.0kb downstream 2.0kb downstream 4932 true Chr08: 6351768-6356699 Populus trichocarpa
Potri.008G100800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6354700-6356699 Populus trichocarpa
Potri.008G100800 5.0kb upstream 5.0kb upstream 7932 true Chr08: 6346768-6354699 Populus trichocarpa
Potri.008G100800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6346768-6351767 Populus trichocarpa
Potri.008G100800 5.0kb downstream 5.0kb downstream 7932 true Chr08: 6351768-6359699 Populus trichocarpa
Potri.008G100800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6354700-6359699 Populus trichocarpa
Potri.008G100800 10.0kb upstream 10.0kb upstream 12932 true Chr08: 6341768-6354699 Populus trichocarpa
Potri.008G100800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6341768-6351767 Populus trichocarpa
Potri.008G100800 10.0kb downstream 10.0kb downstream 12932 true Chr08: 6351768-6364699 Populus trichocarpa
Potri.008G100800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6354700-6364699 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453056 5262 Malpighiales View MSA
124239269 5268 Malvidae View MSA
124063869 5270 Rosid View MSA
123749055 5271 Pentapetalae View MSA
122790901 5272 Eudicot View MSA
122041676 5273 Angiosperm View MSA
121345591 5274 Embryophyte View MSA
123424332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain