Gene : Potri.008G207900 P. trichocarpa v3.1
Defline:  (1 of 64) PTHR31286:SF2 - TA11-LIKE NON-LTR RETROELEMENT PROTEIN-RELATED Genomic Order:  2170
Name:  ? Potri.008G207900 Secondary Identifier:  ? PAC:37271879
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G207900 0.5kb upstream 0.5kb upstream 2103 true Chr08: 15700560-15702662 Populus trichocarpa
Potri.008G207900 0.5kb upstream 0.5kb upstream 500 false Chr08: 15700560-15701059 Populus trichocarpa
Potri.008G207900 0.5kb downstream 0.5kb downstream 2103 true Chr08: 15701060-15703162 Populus trichocarpa
Potri.008G207900 0.5kb downstream 0.5kb downstream 500 false Chr08: 15702663-15703162 Populus trichocarpa
Potri.008G207900 1.0kb upstream 1.0kb upstream 2603 true Chr08: 15700060-15702662 Populus trichocarpa
Potri.008G207900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15700060-15701059 Populus trichocarpa
Potri.008G207900 1.0kb downstream 1.0kb downstream 2603 true Chr08: 15701060-15703662 Populus trichocarpa
Potri.008G207900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15702663-15703662 Populus trichocarpa
Potri.008G207900 2.0kb upstream 2.0kb upstream 3603 true Chr08: 15699060-15702662 Populus trichocarpa
Potri.008G207900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15699060-15701059 Populus trichocarpa
Potri.008G207900 2.0kb downstream 2.0kb downstream 3603 true Chr08: 15701060-15704662 Populus trichocarpa
Potri.008G207900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15702663-15704662 Populus trichocarpa
Potri.008G207900 5.0kb upstream 5.0kb upstream 6603 true Chr08: 15696060-15702662 Populus trichocarpa
Potri.008G207900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15696060-15701059 Populus trichocarpa
Potri.008G207900 5.0kb downstream 5.0kb downstream 6603 true Chr08: 15701060-15707662 Populus trichocarpa
Potri.008G207900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15702663-15707662 Populus trichocarpa
Potri.008G207900 10.0kb upstream 10.0kb upstream 11603 true Chr08: 15691060-15702662 Populus trichocarpa
Potri.008G207900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15691060-15701059 Populus trichocarpa
Potri.008G207900 10.0kb downstream 10.0kb downstream 11603 true Chr08: 15701060-15712662 Populus trichocarpa
Potri.008G207900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15702663-15712662 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406093 5262 Malpighiales View MSA
124252780 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain