Gene : Potri.008G207300 P. trichocarpa v3.1
Defline:  (1 of 7) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  2164
Name:  ? Potri.008G207300 Secondary Identifier:  ? PAC:37271315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G207300 0.5kb upstream 0.5kb upstream 1030 true Chr08: 15225989-15227018 Populus trichocarpa
Potri.008G207300 0.5kb upstream 0.5kb upstream 500 false Chr08: 15225989-15226488 Populus trichocarpa
Potri.008G207300 0.5kb downstream 0.5kb downstream 1030 true Chr08: 15226489-15227518 Populus trichocarpa
Potri.008G207300 0.5kb downstream 0.5kb downstream 500 false Chr08: 15227019-15227518 Populus trichocarpa
Potri.008G207300 1.0kb upstream 1.0kb upstream 1530 true Chr08: 15225489-15227018 Populus trichocarpa
Potri.008G207300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15225489-15226488 Populus trichocarpa
Potri.008G207300 1.0kb downstream 1.0kb downstream 1530 true Chr08: 15226489-15228018 Populus trichocarpa
Potri.008G207300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15227019-15228018 Populus trichocarpa
Potri.008G207300 2.0kb upstream 2.0kb upstream 2530 true Chr08: 15224489-15227018 Populus trichocarpa
Potri.008G207300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15224489-15226488 Populus trichocarpa
Potri.008G207300 2.0kb downstream 2.0kb downstream 2530 true Chr08: 15226489-15229018 Populus trichocarpa
Potri.008G207300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15227019-15229018 Populus trichocarpa
Potri.008G207300 5.0kb upstream 5.0kb upstream 5530 true Chr08: 15221489-15227018 Populus trichocarpa
Potri.008G207300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15221489-15226488 Populus trichocarpa
Potri.008G207300 5.0kb downstream 5.0kb downstream 5530 true Chr08: 15226489-15232018 Populus trichocarpa
Potri.008G207300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15227019-15232018 Populus trichocarpa
Potri.008G207300 10.0kb upstream 10.0kb upstream 10530 true Chr08: 15216489-15227018 Populus trichocarpa
Potri.008G207300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15216489-15226488 Populus trichocarpa
Potri.008G207300 10.0kb downstream 10.0kb downstream 10530 true Chr08: 15226489-15237018 Populus trichocarpa
Potri.008G207300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15227019-15237018 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122394389 5262 Malpighiales Singleton cluster - no MSA
124191808 5268 Malvidae Singleton cluster - no MSA
123912512 5270 Rosid Singleton cluster - no MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain