Gene : Potri.009G060400 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  616
Name:  ? Potri.009G060400 Secondary Identifier:  ? PAC:37226698
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G060400 0.5kb upstream 0.5kb upstream 4440 true Chr09: 6243749-6248188 Populus trichocarpa
Potri.009G060400 0.5kb upstream 0.5kb upstream 500 false Chr09: 6247689-6248188 Populus trichocarpa
Potri.009G060400 0.5kb downstream 0.5kb downstream 4440 true Chr09: 6243249-6247688 Populus trichocarpa
Potri.009G060400 0.5kb downstream 0.5kb downstream 500 false Chr09: 6243249-6243748 Populus trichocarpa
Potri.009G060400 1.0kb upstream 1.0kb upstream 4940 true Chr09: 6243749-6248688 Populus trichocarpa
Potri.009G060400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6247689-6248688 Populus trichocarpa
Potri.009G060400 1.0kb downstream 1.0kb downstream 4940 true Chr09: 6242749-6247688 Populus trichocarpa
Potri.009G060400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6242749-6243748 Populus trichocarpa
Potri.009G060400 2.0kb upstream 2.0kb upstream 5940 true Chr09: 6243749-6249688 Populus trichocarpa
Potri.009G060400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6247689-6249688 Populus trichocarpa
Potri.009G060400 2.0kb downstream 2.0kb downstream 5940 true Chr09: 6241749-6247688 Populus trichocarpa
Potri.009G060400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6241749-6243748 Populus trichocarpa
Potri.009G060400 5.0kb upstream 5.0kb upstream 8940 true Chr09: 6243749-6252688 Populus trichocarpa
Potri.009G060400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6247689-6252688 Populus trichocarpa
Potri.009G060400 5.0kb downstream 5.0kb downstream 8940 true Chr09: 6238749-6247688 Populus trichocarpa
Potri.009G060400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6238749-6243748 Populus trichocarpa
Potri.009G060400 10.0kb upstream 10.0kb upstream 13940 true Chr09: 6243749-6257688 Populus trichocarpa
Potri.009G060400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6247689-6257688 Populus trichocarpa
Potri.009G060400 10.0kb downstream 10.0kb downstream 13940 true Chr09: 6233749-6247688 Populus trichocarpa
Potri.009G060400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6233749-6243748 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453468 5262 Malpighiales View MSA
124237828 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain