Gene : Potri.009G109800 P. trichocarpa v3.1
Defline:  (1 of 5) PF05562 - Cold acclimation protein WCOR413 (WCOR413) Genomic Order:  1125
Name:  ? Potri.009G109800 Secondary Identifier:  ? PAC:37227545
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G109800 0.5kb upstream 0.5kb upstream 2610 true Chr09: 9447011-9449620 Populus trichocarpa
Potri.009G109800 0.5kb upstream 0.5kb upstream 500 false Chr09: 9447011-9447510 Populus trichocarpa
Potri.009G109800 0.5kb downstream 0.5kb downstream 2610 true Chr09: 9447511-9450120 Populus trichocarpa
Potri.009G109800 0.5kb downstream 0.5kb downstream 500 false Chr09: 9449621-9450120 Populus trichocarpa
Potri.009G109800 1.0kb upstream 1.0kb upstream 3110 true Chr09: 9446511-9449620 Populus trichocarpa
Potri.009G109800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9446511-9447510 Populus trichocarpa
Potri.009G109800 1.0kb downstream 1.0kb downstream 3110 true Chr09: 9447511-9450620 Populus trichocarpa
Potri.009G109800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9449621-9450620 Populus trichocarpa
Potri.009G109800 2.0kb upstream 2.0kb upstream 4110 true Chr09: 9445511-9449620 Populus trichocarpa
Potri.009G109800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9445511-9447510 Populus trichocarpa
Potri.009G109800 2.0kb downstream 2.0kb downstream 4110 true Chr09: 9447511-9451620 Populus trichocarpa
Potri.009G109800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9449621-9451620 Populus trichocarpa
Potri.009G109800 5.0kb upstream 5.0kb upstream 7110 true Chr09: 9442511-9449620 Populus trichocarpa
Potri.009G109800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9442511-9447510 Populus trichocarpa
Potri.009G109800 5.0kb downstream 5.0kb downstream 7110 true Chr09: 9447511-9454620 Populus trichocarpa
Potri.009G109800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9449621-9454620 Populus trichocarpa
Potri.009G109800 10.0kb upstream 10.0kb upstream 12110 true Chr09: 9437511-9449620 Populus trichocarpa
Potri.009G109800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9437511-9447510 Populus trichocarpa
Potri.009G109800 10.0kb downstream 10.0kb downstream 12110 true Chr09: 9447511-9459620 Populus trichocarpa
Potri.009G109800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9449621-9459620 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456529 5262 Malpighiales View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain