Gene : Potri.010G042100 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  414
Name:  ? Potri.010G042100 Secondary Identifier:  ? PAC:37222882
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G042100 0.5kb upstream 0.5kb upstream 4646 true Chr10: 7242759-7247404 Populus trichocarpa
Potri.010G042100 0.5kb upstream 0.5kb upstream 500 false Chr10: 7246905-7247404 Populus trichocarpa
Potri.010G042100 0.5kb downstream 0.5kb downstream 4646 true Chr10: 7242259-7246904 Populus trichocarpa
Potri.010G042100 0.5kb downstream 0.5kb downstream 500 false Chr10: 7242259-7242758 Populus trichocarpa
Potri.010G042100 1.0kb upstream 1.0kb upstream 5146 true Chr10: 7242759-7247904 Populus trichocarpa
Potri.010G042100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7246905-7247904 Populus trichocarpa
Potri.010G042100 1.0kb downstream 1.0kb downstream 5146 true Chr10: 7241759-7246904 Populus trichocarpa
Potri.010G042100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7241759-7242758 Populus trichocarpa
Potri.010G042100 2.0kb upstream 2.0kb upstream 6146 true Chr10: 7242759-7248904 Populus trichocarpa
Potri.010G042100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7246905-7248904 Populus trichocarpa
Potri.010G042100 2.0kb downstream 2.0kb downstream 6146 true Chr10: 7240759-7246904 Populus trichocarpa
Potri.010G042100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7240759-7242758 Populus trichocarpa
Potri.010G042100 5.0kb upstream 5.0kb upstream 9146 true Chr10: 7242759-7251904 Populus trichocarpa
Potri.010G042100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7246905-7251904 Populus trichocarpa
Potri.010G042100 5.0kb downstream 5.0kb downstream 9146 true Chr10: 7237759-7246904 Populus trichocarpa
Potri.010G042100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7237759-7242758 Populus trichocarpa
Potri.010G042100 10.0kb upstream 10.0kb upstream 14146 true Chr10: 7242759-7256904 Populus trichocarpa
Potri.010G042100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7246905-7256904 Populus trichocarpa
Potri.010G042100 10.0kb downstream 10.0kb downstream 14146 true Chr10: 7232759-7246904 Populus trichocarpa
Potri.010G042100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7232759-7242758 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452540 5262 Malpighiales View MSA
124241872 5268 Malvidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain