Gene : Potri.010G011400 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11206:SF165 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  118
Name:  ? Potri.010G011400 Secondary Identifier:  ? PAC:37222802

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G011400 0.5kb upstream 0.5kb upstream 2708 true Chr10: 1480460-1483167 Populus trichocarpa
Potri.010G011400 0.5kb upstream 0.5kb upstream 500 false Chr10: 1480460-1480959 Populus trichocarpa
Potri.010G011400 0.5kb downstream 0.5kb downstream 2708 true Chr10: 1480960-1483667 Populus trichocarpa
Potri.010G011400 0.5kb downstream 0.5kb downstream 500 false Chr10: 1483168-1483667 Populus trichocarpa
Potri.010G011400 1.0kb upstream 1.0kb upstream 3208 true Chr10: 1479960-1483167 Populus trichocarpa
Potri.010G011400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1479960-1480959 Populus trichocarpa
Potri.010G011400 1.0kb downstream 1.0kb downstream 3208 true Chr10: 1480960-1484167 Populus trichocarpa
Potri.010G011400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1483168-1484167 Populus trichocarpa
Potri.010G011400 2.0kb upstream 2.0kb upstream 4208 true Chr10: 1478960-1483167 Populus trichocarpa
Potri.010G011400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1478960-1480959 Populus trichocarpa
Potri.010G011400 2.0kb downstream 2.0kb downstream 4208 true Chr10: 1480960-1485167 Populus trichocarpa
Potri.010G011400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1483168-1485167 Populus trichocarpa
Potri.010G011400 5.0kb upstream 5.0kb upstream 7208 true Chr10: 1475960-1483167 Populus trichocarpa
Potri.010G011400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1475960-1480959 Populus trichocarpa
Potri.010G011400 5.0kb downstream 5.0kb downstream 7208 true Chr10: 1480960-1488167 Populus trichocarpa
Potri.010G011400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1483168-1488167 Populus trichocarpa
Potri.010G011400 10.0kb upstream 10.0kb upstream 12208 true Chr10: 1470960-1483167 Populus trichocarpa
Potri.010G011400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1470960-1480959 Populus trichocarpa
Potri.010G011400 10.0kb downstream 10.0kb downstream 12208 true Chr10: 1480960-1493167 Populus trichocarpa
Potri.010G011400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1483168-1493167 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460129 5262 Malpighiales View MSA
124253972 5268 Malvidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain