Gene : Potri.T131100 P. trichocarpa v3.1
Defline:  (1 of 4) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  1
Name:  ? Potri.T131100 Secondary Identifier:  ? PAC:37232589
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T131100 0.5kb upstream 0.5kb upstream 6691 true scaffold_252: 4266-10956 Populus trichocarpa
Potri.T131100 0.5kb upstream 0.5kb upstream 500 false scaffold_252: 4266-4765 Populus trichocarpa
Potri.T131100 0.5kb downstream 0.5kb downstream 6691 true scaffold_252: 4766-11456 Populus trichocarpa
Potri.T131100 0.5kb downstream 0.5kb downstream 500 false scaffold_252: 10957-11456 Populus trichocarpa
Potri.T131100 1.0kb upstream 1.0kb upstream 7191 true scaffold_252: 3766-10956 Populus trichocarpa
Potri.T131100 1.0kb upstream 1.0kb upstream 1000 false scaffold_252: 3766-4765 Populus trichocarpa
Potri.T131100 1.0kb downstream 1.0kb downstream 7191 true scaffold_252: 4766-11956 Populus trichocarpa
Potri.T131100 1.0kb downstream 1.0kb downstream 1000 false scaffold_252: 10957-11956 Populus trichocarpa
Potri.T131100 2.0kb upstream 2.0kb upstream 8191 true scaffold_252: 2766-10956 Populus trichocarpa
Potri.T131100 2.0kb upstream 2.0kb upstream 2000 false scaffold_252: 2766-4765 Populus trichocarpa
Potri.T131100 2.0kb downstream 2.0kb downstream 8191 true scaffold_252: 4766-12956 Populus trichocarpa
Potri.T131100 2.0kb downstream 2.0kb downstream 2000 false scaffold_252: 10957-12956 Populus trichocarpa
Potri.T131100 5.0kb upstream 5.0kb upstream 10956 true scaffold_252: 1-10956 Populus trichocarpa
Potri.T131100 5.0kb upstream 5.0kb upstream 4765 false scaffold_252: 1-4765 Populus trichocarpa
Potri.T131100 5.0kb downstream 5.0kb downstream 11191 true scaffold_252: 4766-15956 Populus trichocarpa
Potri.T131100 5.0kb downstream 5.0kb downstream 5000 false scaffold_252: 10957-15956 Populus trichocarpa
Potri.T131100 10.0kb upstream 10.0kb upstream 10956 true scaffold_252: 1-10956 Populus trichocarpa
Potri.T131100 10.0kb upstream 10.0kb upstream 4765 false scaffold_252: 1-4765 Populus trichocarpa
Potri.T131100 10.0kb downstream 10.0kb downstream 16191 true scaffold_252: 4766-20956 Populus trichocarpa
Potri.T131100 10.0kb downstream 10.0kb downstream 10000 false scaffold_252: 10957-20956 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457186 5262 Malpighiales View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain