Gene : Potri.017G004500 P. trichocarpa v3.1
Defline:  (1 of 13) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  47
Name:  ? Potri.017G004500 Secondary Identifier:  ? PAC:37224042
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G004500 0.5kb upstream 0.5kb upstream 2032 true Chr17: 286278-288309 Populus trichocarpa
Potri.017G004500 0.5kb upstream 0.5kb upstream 500 false Chr17: 286278-286777 Populus trichocarpa
Potri.017G004500 0.5kb downstream 0.5kb downstream 2032 true Chr17: 286778-288809 Populus trichocarpa
Potri.017G004500 0.5kb downstream 0.5kb downstream 500 false Chr17: 288310-288809 Populus trichocarpa
Potri.017G004500 1.0kb upstream 1.0kb upstream 2532 true Chr17: 285778-288309 Populus trichocarpa
Potri.017G004500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 285778-286777 Populus trichocarpa
Potri.017G004500 1.0kb downstream 1.0kb downstream 2532 true Chr17: 286778-289309 Populus trichocarpa
Potri.017G004500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 288310-289309 Populus trichocarpa
Potri.017G004500 2.0kb upstream 2.0kb upstream 3532 true Chr17: 284778-288309 Populus trichocarpa
Potri.017G004500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 284778-286777 Populus trichocarpa
Potri.017G004500 2.0kb downstream 2.0kb downstream 3532 true Chr17: 286778-290309 Populus trichocarpa
Potri.017G004500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 288310-290309 Populus trichocarpa
Potri.017G004500 5.0kb upstream 5.0kb upstream 6532 true Chr17: 281778-288309 Populus trichocarpa
Potri.017G004500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 281778-286777 Populus trichocarpa
Potri.017G004500 5.0kb downstream 5.0kb downstream 6532 true Chr17: 286778-293309 Populus trichocarpa
Potri.017G004500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 288310-293309 Populus trichocarpa
Potri.017G004500 10.0kb upstream 10.0kb upstream 11532 true Chr17: 276778-288309 Populus trichocarpa
Potri.017G004500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 276778-286777 Populus trichocarpa
Potri.017G004500 10.0kb downstream 10.0kb downstream 11532 true Chr17: 286778-298309 Populus trichocarpa
Potri.017G004500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 288310-298309 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448227 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain