Gene : Potri.017G111500 P. trichocarpa v3.1

Defline:  (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) Genomic Order:  1168
Name:  ? Potri.017G111500 Secondary Identifier:  ? PAC:37224791

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G111500 0.5kb upstream 0.5kb upstream 7146 true Chr17: 12716992-12724137 Populus trichocarpa
Potri.017G111500 0.5kb upstream 0.5kb upstream 500 false Chr17: 12716992-12717491 Populus trichocarpa
Potri.017G111500 0.5kb downstream 0.5kb downstream 7146 true Chr17: 12717492-12724637 Populus trichocarpa
Potri.017G111500 0.5kb downstream 0.5kb downstream 500 false Chr17: 12724138-12724637 Populus trichocarpa
Potri.017G111500 1.0kb upstream 1.0kb upstream 7646 true Chr17: 12716492-12724137 Populus trichocarpa
Potri.017G111500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12716492-12717491 Populus trichocarpa
Potri.017G111500 1.0kb downstream 1.0kb downstream 7646 true Chr17: 12717492-12725137 Populus trichocarpa
Potri.017G111500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12724138-12725137 Populus trichocarpa
Potri.017G111500 2.0kb upstream 2.0kb upstream 8646 true Chr17: 12715492-12724137 Populus trichocarpa
Potri.017G111500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12715492-12717491 Populus trichocarpa
Potri.017G111500 2.0kb downstream 2.0kb downstream 8646 true Chr17: 12717492-12726137 Populus trichocarpa
Potri.017G111500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12724138-12726137 Populus trichocarpa
Potri.017G111500 5.0kb upstream 5.0kb upstream 11646 true Chr17: 12712492-12724137 Populus trichocarpa
Potri.017G111500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12712492-12717491 Populus trichocarpa
Potri.017G111500 5.0kb downstream 5.0kb downstream 11646 true Chr17: 12717492-12729137 Populus trichocarpa
Potri.017G111500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12724138-12729137 Populus trichocarpa
Potri.017G111500 10.0kb upstream 10.0kb upstream 16646 true Chr17: 12707492-12724137 Populus trichocarpa
Potri.017G111500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12707492-12717491 Populus trichocarpa
Potri.017G111500 10.0kb downstream 10.0kb downstream 16646 true Chr17: 12717492-12734137 Populus trichocarpa
Potri.017G111500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12724138-12734137 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426128 5262 Malpighiales View MSA
124245469 5268 Malvidae View MSA
124065537 5270 Rosid View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain