Protein Family : decapping 5 124245469

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  35

35 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29738.t000031 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H R. communis v0.1 6340   29738: 240196-246535
29673.t000014 (1 of 3) K18749 - protein LSM14 (LSM14, RAP55, SCD6) R. communis v0.1 7591   29673: 82184-89774
orange1.1g005730m.g (1 of 2) PTHR13586 - SCD6 PROTEIN-RELATED C. sinensis v1.1 5072   scaffold00071: 181074-186145
AT1G26110 (1 of 3) K18749 - protein LSM14 (LSM14, RAP55, SCD6) A. thaliana TAIR10 DCP5 3442   Chr1: 9024345-9027786
Thhalv10007133m.g (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H E. salsugineum v1.0 3596   scaffold_5: 6309442-6313037
Ciclev10011356m.g (1 of 2) PTHR13586 - SCD6 PROTEIN-RELATED C. clementina v1.0 5147   scaffold_6: 23419105-23424251
Lus10017884.g (1 of 1) PTHR13586//PTHR13586:SF4 - SCD6 PROTEIN-RELATED L. usitatissimum v1.0 4513   scaffold35: 547160-551672
Lus10017885.g (1 of 6) PTHR13586 - SCD6 PROTEIN-RELATED L. usitatissimum v1.0 6090   scaffold35: 552785-558874
Lus10035051.g (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H L. usitatissimum v1.0 4233   scaffold43: 229704-233936
Lus10035052.g (1 of 6) PTHR13586 - SCD6 PROTEIN-RELATED L. usitatissimum v1.0 4547   scaffold43: 235494-240040
Gorai.004G046600 (1 of 1) PTHR13586//PTHR13586:SF4 - SCD6 PROTEIN-RELATED G. raimondii v2.1 7569   Chr04: 4129331-4136899
Gorai.008G187400 (1 of 3) PTHR13586 - SCD6 PROTEIN-RELATED G. raimondii v2.1 4065   Chr08: 46839870-46843934
Thecc1EG011884 (1 of 1) KOG1073 - Uncharacterized mRNA-associated protein RAP55 T. cacao v1.1 4480   scaffold_2: 42187101-42191580
Thecc1EG019522 (1 of 1) PTHR13586//PTHR13586:SF3//PTHR13586:SF4 - SCD6 PROTEIN-RELATED // DECAPPING 5-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED T. cacao v1.1 10838   scaffold_4: 23098799-23109636
Araha.50307s0003 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H A. halleri v1.1 3345   Scaffold50307: 4269-7613
Cagra.11546s0007 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H C. grandiflora v1.1 3459   Scaffold11546: 25581-29039
Brara.H02121 (1 of 2) PF09532//PF12701 - FDF domain (FDF) // Scd6-like Sm domain (LSM14) B. rapa FPsc v1.3 3321   A08: 18896927-18900247
Bostr.12659s0392 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H B. stricta v1.2 3455   Scaffold12659: 2108829-2112283
SapurV1A.0304s0200 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) S. purpurea v1.0 5725   Scaffold0304: 178343-184067
SapurV1A.0682s0100 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) S. purpurea v1.0 6869   Scaffold0682: 93835-100703
SapurV1A.0726s0120 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) S. purpurea v1.0 5787   Scaffold0726: 113979-119765
SapurV1A.0060s0750 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) S. purpurea v1.0 5537   chr08: 7836264-7841800
SapurV1A.0079s0620 (1 of 3) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H S. purpurea v1.0 4872   chr08: 7908479-7913350
Manes.06G073900 (1 of 1) KOG1073 - Uncharacterized mRNA-associated protein RAP55 M. esculenta v6.1 5262   Chromosome06: 18825788-18831049
Manes.14G096300 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H M. esculenta v6.1 7673   Chromosome14: 7784995-7792667
AL1G39670 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H A. lyrata v2.1 3475   scaffold_1: 11495309-11498783
Potri.004G104000 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) P. trichocarpa v3.1 6268   Chr04: 9127300-9133567
Potri.008G114900 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) P. trichocarpa v3.1 5387   Chr08: 7361102-7366488
Potri.017G111500 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) P. trichocarpa v3.1 6646   Chr17: 12717492-12724137
Potri.010G131400 (1 of 5) K18749 - protein LSM14 (LSM14, RAP55, SCD6) P. trichocarpa v3.1 5227   Chr10: 14623525-14628751

35 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29673.m000913 R. communis v0.1 124245469 decapping 5 2 5268 Malvidae
orange1.1g005730m C. sinensis v1.1 124245469 decapping 5 1 5268 Malvidae
Lus10017885 L. usitatissimum v1.0 124245469 decapping 5 4 5268 Malvidae
Lus10035051 L. usitatissimum v1.0 124245469 decapping 5 4 5268 Malvidae
Lus10035052 L. usitatissimum v1.0 124245469 decapping 5 4 5268 Malvidae
Thecc1EG011884t1 T. cacao v1.1 124245469 decapping 5 2 5268 Malvidae
SapurV1A.0079s0620.1.p S. purpurea v1.0 124245469 decapping 5 5 5268 Malvidae
SapurV1A.0060s0750.1.p S. purpurea v1.0 124245469 decapping 5 5 5268 Malvidae
Manes.06G073900.1.p M. esculenta v6.1 124245469 decapping 5 2 5268 Malvidae
Manes.14G096300.1.p M. esculenta v6.1 124245469 decapping 5 2 5268 Malvidae
Potri.010G131400.2.p P. trichocarpa v3.1 124245469 decapping 5 4 5268 Malvidae
Potri.017G111500.1.p P. trichocarpa v3.1 124245469 decapping 5 4 5268 Malvidae
Potri.008G114900.1.p P. trichocarpa v3.1 124245469 decapping 5 4 5268 Malvidae
Podel.08G135600.1.p P. deltoides WV94 v2.1 124245469 decapping 5 4 5268 Malvidae
Podel.17G118500.1.p P. deltoides WV94 v2.1 124245469 decapping 5 4 5268 Malvidae
Podel.10G131500.1.p P. deltoides WV94 v2.1 124245469 decapping 5 4 5268 Malvidae
29738.m001029 R. communis v0.1 124245469 decapping 5 2 5268 Malvidae
AT1G26110.1 A. thaliana TAIR10 124245469 decapping 5 1 5268 Malvidae
Thhalv10007133m E. salsugineum v1.0 124245469 decapping 5 1 5268 Malvidae
Ciclev10011356m C. clementina v1.0 124245469 decapping 5 1 5268 Malvidae
Lus10017884 L. usitatissimum v1.0 124245469 decapping 5 4 5268 Malvidae
Gorai.004G046600.1 G. raimondii v2.1 124245469 decapping 5 2 5268 Malvidae
Gorai.008G187400.1 G. raimondii v2.1 124245469 decapping 5 2 5268 Malvidae
Thecc1EG019522t2 T. cacao v1.1 124245469 decapping 5 2 5268 Malvidae
Araha.50307s0003.1.p A. halleri v1.1 124245469 decapping 5 1 5268 Malvidae
Cagra.11546s0007.1.p C. grandiflora v1.1 124245469 decapping 5 1 5268 Malvidae
Brara.H02121.1.p B. rapa FPsc v1.3 124245469 decapping 5 1 5268 Malvidae
Bostr.12659s0392.1.p B. stricta v1.2 124245469 decapping 5 1 5268 Malvidae
SapurV1A.0304s0200.1.p S. purpurea v1.0 124245469 decapping 5 5 5268 Malvidae
SapurV1A.0726s0120.1.p S. purpurea v1.0 124245469 decapping 5 5 5268 Malvidae