Gene : Cagra.11546s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H Genomic Order:  7
Name:  ? Cagra.11546s0007 Secondary Identifier:  ? PAC:28897672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0007 0.5kb upstream 0.5kb upstream 3959 true Scaffold11546: 25581-29539 Capsella grandiflora
Cagra.11546s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 29040-29539 Capsella grandiflora
Cagra.11546s0007 0.5kb downstream 0.5kb downstream 3959 true Scaffold11546: 25081-29039 Capsella grandiflora
Cagra.11546s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 25081-25580 Capsella grandiflora
Cagra.11546s0007 1.0kb upstream 1.0kb upstream 4459 true Scaffold11546: 25581-30039 Capsella grandiflora
Cagra.11546s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 29040-30039 Capsella grandiflora
Cagra.11546s0007 1.0kb downstream 1.0kb downstream 4459 true Scaffold11546: 24581-29039 Capsella grandiflora
Cagra.11546s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 24581-25580 Capsella grandiflora
Cagra.11546s0007 2.0kb upstream 2.0kb upstream 5459 true Scaffold11546: 25581-31039 Capsella grandiflora
Cagra.11546s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 29040-31039 Capsella grandiflora
Cagra.11546s0007 2.0kb downstream 2.0kb downstream 5459 true Scaffold11546: 23581-29039 Capsella grandiflora
Cagra.11546s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 23581-25580 Capsella grandiflora
Cagra.11546s0007 5.0kb upstream 5.0kb upstream 8459 true Scaffold11546: 25581-34039 Capsella grandiflora
Cagra.11546s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 29040-34039 Capsella grandiflora
Cagra.11546s0007 5.0kb downstream 5.0kb downstream 8459 true Scaffold11546: 20581-29039 Capsella grandiflora
Cagra.11546s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 20581-25580 Capsella grandiflora
Cagra.11546s0007 10.0kb upstream 10.0kb upstream 13459 true Scaffold11546: 25581-39039 Capsella grandiflora
Cagra.11546s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold11546: 29040-39039 Capsella grandiflora
Cagra.11546s0007 10.0kb downstream 10.0kb downstream 13459 true Scaffold11546: 15581-29039 Capsella grandiflora
Cagra.11546s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 15581-25580 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347265 5266 SBM View MSA
122362703 5261 Brassicaceae View MSA
123831583 5264 Brassicales-Malvales View MSA
124245469 5268 Malvidae View MSA
124065537 5270 Rosid View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain