Protein Family : decapping 5 124347265

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  14

14 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g005730m.g (1 of 2) PTHR13586 - SCD6 PROTEIN-RELATED C. sinensis v1.1 5072   scaffold00071: 181074-186145
AT1G26110 (1 of 3) K18749 - protein LSM14 (LSM14, RAP55, SCD6) A. thaliana TAIR10 DCP5 3442   Chr1: 9024345-9027786
Thhalv10007133m.g (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H E. salsugineum v1.0 3596   scaffold_5: 6309442-6313037
Ciclev10011356m.g (1 of 2) PTHR13586 - SCD6 PROTEIN-RELATED C. clementina v1.0 5147   scaffold_6: 23419105-23424251
Gorai.004G046600 (1 of 1) PTHR13586//PTHR13586:SF4 - SCD6 PROTEIN-RELATED G. raimondii v2.1 7569   Chr04: 4129331-4136899
Gorai.008G187400 (1 of 3) PTHR13586 - SCD6 PROTEIN-RELATED G. raimondii v2.1 4065   Chr08: 46839870-46843934
Thecc1EG011884 (1 of 1) KOG1073 - Uncharacterized mRNA-associated protein RAP55 T. cacao v1.1 4480   scaffold_2: 42187101-42191580
Thecc1EG019522 (1 of 1) PTHR13586//PTHR13586:SF3//PTHR13586:SF4 - SCD6 PROTEIN-RELATED // DECAPPING 5-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED T. cacao v1.1 10838   scaffold_4: 23098799-23109636
Araha.50307s0003 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H A. halleri v1.1 3345   Scaffold50307: 4269-7613
Cagra.11546s0007 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H C. grandiflora v1.1 3459   Scaffold11546: 25581-29039
Brara.H02121 (1 of 2) PF09532//PF12701 - FDF domain (FDF) // Scd6-like Sm domain (LSM14) B. rapa FPsc v1.3 3321   A08: 18896927-18900247
Bostr.12659s0392 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H B. stricta v1.2 3455   Scaffold12659: 2108829-2112283
AL1G39670 (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H A. lyrata v2.1 3475   scaffold_1: 11495309-11498783
Carub.0001s2486 (1 of 3) K18749 - protein LSM14 (LSM14, RAP55, SCD6) C. rubella v1.1 3440   scaffold_1: 8952900-8956339

14 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g005730m C. sinensis v1.1 124347265 decapping 5 1 5266 SBM
Thecc1EG011884t1 T. cacao v1.1 124347265 decapping 5 2 5266 SBM
AT1G26110.1 A. thaliana TAIR10 124347265 decapping 5 1 5266 SBM
Thhalv10007133m E. salsugineum v1.0 124347265 decapping 5 1 5266 SBM
Ciclev10011356m C. clementina v1.0 124347265 decapping 5 1 5266 SBM
Gorai.008G187400.1 G. raimondii v2.1 124347265 decapping 5 2 5266 SBM
Gorai.004G046600.1 G. raimondii v2.1 124347265 decapping 5 2 5266 SBM
Thecc1EG019522t2 T. cacao v1.1 124347265 decapping 5 2 5266 SBM
Araha.50307s0003.1.p A. halleri v1.1 124347265 decapping 5 1 5266 SBM
Cagra.11546s0007.1.p C. grandiflora v1.1 124347265 decapping 5 1 5266 SBM
Brara.H02121.1.p B. rapa FPsc v1.3 124347265 decapping 5 1 5266 SBM
Bostr.12659s0392.1.p B. stricta v1.2 124347265 decapping 5 1 5266 SBM
AL1G39670.t1 A. lyrata v2.1 124347265 decapping 5 1 5266 SBM
Carub.0001s2486.1.p C. rubella v1.1 124347265 decapping 5 1 5266 SBM