Gene : Potri.010G180000 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31642:SF40 - DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  1862
Name:  ? Potri.010G180000 Secondary Identifier:  ? PAC:37222724
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7120 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G180000 0.5kb upstream 0.5kb upstream 5197 true Chr10: 17859105-17864301 Populus trichocarpa
Potri.010G180000 0.5kb upstream 0.5kb upstream 500 false Chr10: 17863802-17864301 Populus trichocarpa
Potri.010G180000 0.5kb downstream 0.5kb downstream 5197 true Chr10: 17858605-17863801 Populus trichocarpa
Potri.010G180000 0.5kb downstream 0.5kb downstream 500 false Chr10: 17858605-17859104 Populus trichocarpa
Potri.010G180000 1.0kb upstream 1.0kb upstream 5697 true Chr10: 17859105-17864801 Populus trichocarpa
Potri.010G180000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17863802-17864801 Populus trichocarpa
Potri.010G180000 1.0kb downstream 1.0kb downstream 5697 true Chr10: 17858105-17863801 Populus trichocarpa
Potri.010G180000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17858105-17859104 Populus trichocarpa
Potri.010G180000 2.0kb upstream 2.0kb upstream 6697 true Chr10: 17859105-17865801 Populus trichocarpa
Potri.010G180000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17863802-17865801 Populus trichocarpa
Potri.010G180000 2.0kb downstream 2.0kb downstream 6697 true Chr10: 17857105-17863801 Populus trichocarpa
Potri.010G180000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17857105-17859104 Populus trichocarpa
Potri.010G180000 5.0kb upstream 5.0kb upstream 9697 true Chr10: 17859105-17868801 Populus trichocarpa
Potri.010G180000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17863802-17868801 Populus trichocarpa
Potri.010G180000 5.0kb downstream 5.0kb downstream 9697 true Chr10: 17854105-17863801 Populus trichocarpa
Potri.010G180000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17854105-17859104 Populus trichocarpa
Potri.010G180000 10.0kb upstream 10.0kb upstream 14697 true Chr10: 17859105-17873801 Populus trichocarpa
Potri.010G180000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17863802-17873801 Populus trichocarpa
Potri.010G180000 10.0kb downstream 10.0kb downstream 14697 true Chr10: 17849105-17863801 Populus trichocarpa
Potri.010G180000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17849105-17859104 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457469 5262 Malpighiales View MSA
124243245 5268 Malvidae View MSA
124063642 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain