Gene : Potri.010G171600 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR11406//PTHR11406:SF9 - PHOSPHOGLYCERATE KINASE // PHOSPHOGLYCERATE KINASE Genomic Order:  1775
Name:  ? Potri.010G171600 Secondary Identifier:  ? PAC:37221856

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa SUCSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G171600 0.5kb upstream 0.5kb upstream 4218 true Chr10: 17293837-17298054 Populus trichocarpa
Potri.010G171600 0.5kb upstream 0.5kb upstream 500 false Chr10: 17293837-17294336 Populus trichocarpa
Potri.010G171600 0.5kb downstream 0.5kb downstream 4218 true Chr10: 17294337-17298554 Populus trichocarpa
Potri.010G171600 0.5kb downstream 0.5kb downstream 500 false Chr10: 17298055-17298554 Populus trichocarpa
Potri.010G171600 1.0kb upstream 1.0kb upstream 4718 true Chr10: 17293337-17298054 Populus trichocarpa
Potri.010G171600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17293337-17294336 Populus trichocarpa
Potri.010G171600 1.0kb downstream 1.0kb downstream 4718 true Chr10: 17294337-17299054 Populus trichocarpa
Potri.010G171600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17298055-17299054 Populus trichocarpa
Potri.010G171600 2.0kb upstream 2.0kb upstream 5718 true Chr10: 17292337-17298054 Populus trichocarpa
Potri.010G171600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17292337-17294336 Populus trichocarpa
Potri.010G171600 2.0kb downstream 2.0kb downstream 5718 true Chr10: 17294337-17300054 Populus trichocarpa
Potri.010G171600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17298055-17300054 Populus trichocarpa
Potri.010G171600 5.0kb upstream 5.0kb upstream 8718 true Chr10: 17289337-17298054 Populus trichocarpa
Potri.010G171600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17289337-17294336 Populus trichocarpa
Potri.010G171600 5.0kb downstream 5.0kb downstream 8718 true Chr10: 17294337-17303054 Populus trichocarpa
Potri.010G171600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17298055-17303054 Populus trichocarpa
Potri.010G171600 10.0kb upstream 10.0kb upstream 13718 true Chr10: 17284337-17298054 Populus trichocarpa
Potri.010G171600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17284337-17294336 Populus trichocarpa
Potri.010G171600 10.0kb downstream 10.0kb downstream 13718 true Chr10: 17294337-17308054 Populus trichocarpa
Potri.010G171600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17298055-17308054 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040878 5273 Angiosperm View MSA
122453402 5262 Malpighiales View MSA
124253761 5268 Malvidae View MSA
124067355 5270 Rosid View MSA
123751254 5271 Pentapetalae View MSA
122790171 5272 Eudicot View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain