Gene : Potri.011G023900 P. trichocarpa v3.1
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  244
Name:  ? Potri.011G023900 Secondary Identifier:  ? PAC:37240045
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  
Ptrichocarpa HEME-BIOSYNTHESIS-II Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  

Genomics

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Gene Structure Displayer

Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G023900 0.5kb upstream 0.5kb upstream 3603 true Chr11: 1976106-1979708 Populus trichocarpa
Potri.011G023900 0.5kb upstream 0.5kb upstream 500 false Chr11: 1979209-1979708 Populus trichocarpa
Potri.011G023900 0.5kb downstream 0.5kb downstream 3603 true Chr11: 1975606-1979208 Populus trichocarpa
Potri.011G023900 0.5kb downstream 0.5kb downstream 500 false Chr11: 1975606-1976105 Populus trichocarpa
Potri.011G023900 1.0kb upstream 1.0kb upstream 4103 true Chr11: 1976106-1980208 Populus trichocarpa
Potri.011G023900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1979209-1980208 Populus trichocarpa
Potri.011G023900 1.0kb downstream 1.0kb downstream 4103 true Chr11: 1975106-1979208 Populus trichocarpa
Potri.011G023900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1975106-1976105 Populus trichocarpa
Potri.011G023900 2.0kb upstream 2.0kb upstream 5103 true Chr11: 1976106-1981208 Populus trichocarpa
Potri.011G023900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1979209-1981208 Populus trichocarpa
Potri.011G023900 2.0kb downstream 2.0kb downstream 5103 true Chr11: 1974106-1979208 Populus trichocarpa
Potri.011G023900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1974106-1976105 Populus trichocarpa
Potri.011G023900 5.0kb upstream 5.0kb upstream 8103 true Chr11: 1976106-1984208 Populus trichocarpa
Potri.011G023900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1979209-1984208 Populus trichocarpa
Potri.011G023900 5.0kb downstream 5.0kb downstream 8103 true Chr11: 1971106-1979208 Populus trichocarpa
Potri.011G023900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1971106-1976105 Populus trichocarpa
Potri.011G023900 10.0kb upstream 10.0kb upstream 13103 true Chr11: 1976106-1989208 Populus trichocarpa
Potri.011G023900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1979209-1989208 Populus trichocarpa
Potri.011G023900 10.0kb downstream 10.0kb downstream 13103 true Chr11: 1966106-1979208 Populus trichocarpa
Potri.011G023900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1966106-1976105 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454065 5262 Malpighiales View MSA
124243280 5268 Malvidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain