Gene : Potri.011G025100 P. trichocarpa v3.1

Defline:  (1 of 66) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  256
Name:  ? Potri.011G025100 Secondary Identifier:  ? PAC:37239681

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G025100 0.5kb upstream 0.5kb upstream 1079 true Chr11: 2082744-2083822 Populus trichocarpa
Potri.011G025100 0.5kb upstream 0.5kb upstream 500 false Chr11: 2082744-2083243 Populus trichocarpa
Potri.011G025100 0.5kb downstream 0.5kb downstream 1079 true Chr11: 2083244-2084322 Populus trichocarpa
Potri.011G025100 0.5kb downstream 0.5kb downstream 500 false Chr11: 2083823-2084322 Populus trichocarpa
Potri.011G025100 1.0kb upstream 1.0kb upstream 1579 true Chr11: 2082244-2083822 Populus trichocarpa
Potri.011G025100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2082244-2083243 Populus trichocarpa
Potri.011G025100 1.0kb downstream 1.0kb downstream 1579 true Chr11: 2083244-2084822 Populus trichocarpa
Potri.011G025100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2083823-2084822 Populus trichocarpa
Potri.011G025100 2.0kb upstream 2.0kb upstream 2579 true Chr11: 2081244-2083822 Populus trichocarpa
Potri.011G025100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2081244-2083243 Populus trichocarpa
Potri.011G025100 2.0kb downstream 2.0kb downstream 2579 true Chr11: 2083244-2085822 Populus trichocarpa
Potri.011G025100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2083823-2085822 Populus trichocarpa
Potri.011G025100 5.0kb upstream 5.0kb upstream 5579 true Chr11: 2078244-2083822 Populus trichocarpa
Potri.011G025100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2078244-2083243 Populus trichocarpa
Potri.011G025100 5.0kb downstream 5.0kb downstream 5579 true Chr11: 2083244-2088822 Populus trichocarpa
Potri.011G025100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2083823-2088822 Populus trichocarpa
Potri.011G025100 10.0kb upstream 10.0kb upstream 10579 true Chr11: 2073244-2083822 Populus trichocarpa
Potri.011G025100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2073244-2083243 Populus trichocarpa
Potri.011G025100 10.0kb downstream 10.0kb downstream 10579 true Chr11: 2083244-2093822 Populus trichocarpa
Potri.011G025100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2083823-2093822 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455791 5262 Malpighiales View MSA
124246612 5268 Malvidae View MSA
124050602 5270 Rosid View MSA
123743309 5271 Pentapetalae View MSA
122795927 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain