Gene : Potri.011G043600 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR23336:SF10 - B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED Genomic Order:  448
Name:  ? Potri.011G043600 Secondary Identifier:  ? PAC:37241002

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G043600 0.5kb upstream 0.5kb upstream 9936 true Chr11: 3709027-3718962 Populus trichocarpa
Potri.011G043600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3709027-3709526 Populus trichocarpa
Potri.011G043600 0.5kb downstream 0.5kb downstream 9936 true Chr11: 3709527-3719462 Populus trichocarpa
Potri.011G043600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3718963-3719462 Populus trichocarpa
Potri.011G043600 1.0kb upstream 1.0kb upstream 10436 true Chr11: 3708527-3718962 Populus trichocarpa
Potri.011G043600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3708527-3709526 Populus trichocarpa
Potri.011G043600 1.0kb downstream 1.0kb downstream 10436 true Chr11: 3709527-3719962 Populus trichocarpa
Potri.011G043600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3718963-3719962 Populus trichocarpa
Potri.011G043600 2.0kb upstream 2.0kb upstream 11436 true Chr11: 3707527-3718962 Populus trichocarpa
Potri.011G043600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3707527-3709526 Populus trichocarpa
Potri.011G043600 2.0kb downstream 2.0kb downstream 11436 true Chr11: 3709527-3720962 Populus trichocarpa
Potri.011G043600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3718963-3720962 Populus trichocarpa
Potri.011G043600 5.0kb upstream 5.0kb upstream 14436 true Chr11: 3704527-3718962 Populus trichocarpa
Potri.011G043600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3704527-3709526 Populus trichocarpa
Potri.011G043600 5.0kb downstream 5.0kb downstream 14436 true Chr11: 3709527-3723962 Populus trichocarpa
Potri.011G043600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3718963-3723962 Populus trichocarpa
Potri.011G043600 10.0kb upstream 10.0kb upstream 19436 true Chr11: 3699527-3718962 Populus trichocarpa
Potri.011G043600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3699527-3709526 Populus trichocarpa
Potri.011G043600 10.0kb downstream 10.0kb downstream 19436 true Chr11: 3709527-3728962 Populus trichocarpa
Potri.011G043600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3718963-3728962 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459412 5262 Malpighiales View MSA
124244571 5268 Malvidae View MSA
124061756 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain