Gene : Potri.011G115500 P. trichocarpa v3.1
Defline:  (1 of 47) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1187
Name:  ? Potri.011G115500 Secondary Identifier:  ? PAC:37239897
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G115500 0.5kb upstream 0.5kb upstream 3441 true Chr11: 14045866-14049306 Populus trichocarpa
Potri.011G115500 0.5kb upstream 0.5kb upstream 500 false Chr11: 14048807-14049306 Populus trichocarpa
Potri.011G115500 0.5kb downstream 0.5kb downstream 3441 true Chr11: 14045366-14048806 Populus trichocarpa
Potri.011G115500 0.5kb downstream 0.5kb downstream 500 false Chr11: 14045366-14045865 Populus trichocarpa
Potri.011G115500 1.0kb upstream 1.0kb upstream 3941 true Chr11: 14045866-14049806 Populus trichocarpa
Potri.011G115500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14048807-14049806 Populus trichocarpa
Potri.011G115500 1.0kb downstream 1.0kb downstream 3941 true Chr11: 14044866-14048806 Populus trichocarpa
Potri.011G115500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14044866-14045865 Populus trichocarpa
Potri.011G115500 2.0kb upstream 2.0kb upstream 4941 true Chr11: 14045866-14050806 Populus trichocarpa
Potri.011G115500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14048807-14050806 Populus trichocarpa
Potri.011G115500 2.0kb downstream 2.0kb downstream 4941 true Chr11: 14043866-14048806 Populus trichocarpa
Potri.011G115500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14043866-14045865 Populus trichocarpa
Potri.011G115500 5.0kb upstream 5.0kb upstream 7941 true Chr11: 14045866-14053806 Populus trichocarpa
Potri.011G115500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14048807-14053806 Populus trichocarpa
Potri.011G115500 5.0kb downstream 5.0kb downstream 7941 true Chr11: 14040866-14048806 Populus trichocarpa
Potri.011G115500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14040866-14045865 Populus trichocarpa
Potri.011G115500 10.0kb upstream 10.0kb upstream 12941 true Chr11: 14045866-14058806 Populus trichocarpa
Potri.011G115500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14048807-14058806 Populus trichocarpa
Potri.011G115500 10.0kb downstream 10.0kb downstream 12941 true Chr11: 14035866-14048806 Populus trichocarpa
Potri.011G115500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14035866-14045865 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122447933 5262 Malpighiales View MSA
124242787 5268 Malvidae View MSA
124050205 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain