Gene : Potri.012G015500 P. trichocarpa v3.1
Defline:  (1 of 6) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  163
Name:  ? Potri.012G015500 Secondary Identifier:  ? PAC:37280852
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G015500 0.5kb upstream 0.5kb upstream 3828 true Chr12: 1492801-1496628 Populus trichocarpa
Potri.012G015500 0.5kb upstream 0.5kb upstream 500 false Chr12: 1496129-1496628 Populus trichocarpa
Potri.012G015500 0.5kb downstream 0.5kb downstream 3828 true Chr12: 1492301-1496128 Populus trichocarpa
Potri.012G015500 0.5kb downstream 0.5kb downstream 500 false Chr12: 1492301-1492800 Populus trichocarpa
Potri.012G015500 1.0kb upstream 1.0kb upstream 4328 true Chr12: 1492801-1497128 Populus trichocarpa
Potri.012G015500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1496129-1497128 Populus trichocarpa
Potri.012G015500 1.0kb downstream 1.0kb downstream 4328 true Chr12: 1491801-1496128 Populus trichocarpa
Potri.012G015500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1491801-1492800 Populus trichocarpa
Potri.012G015500 2.0kb upstream 2.0kb upstream 5328 true Chr12: 1492801-1498128 Populus trichocarpa
Potri.012G015500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1496129-1498128 Populus trichocarpa
Potri.012G015500 2.0kb downstream 2.0kb downstream 5328 true Chr12: 1490801-1496128 Populus trichocarpa
Potri.012G015500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1490801-1492800 Populus trichocarpa
Potri.012G015500 5.0kb upstream 5.0kb upstream 8328 true Chr12: 1492801-1501128 Populus trichocarpa
Potri.012G015500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1496129-1501128 Populus trichocarpa
Potri.012G015500 5.0kb downstream 5.0kb downstream 8328 true Chr12: 1487801-1496128 Populus trichocarpa
Potri.012G015500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1487801-1492800 Populus trichocarpa
Potri.012G015500 10.0kb upstream 10.0kb upstream 13328 true Chr12: 1492801-1506128 Populus trichocarpa
Potri.012G015500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1496129-1506128 Populus trichocarpa
Potri.012G015500 10.0kb downstream 10.0kb downstream 13328 true Chr12: 1482801-1496128 Populus trichocarpa
Potri.012G015500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1482801-1492800 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425893 5262 Malpighiales View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain