Gene : Potri.012G141200 P. trichocarpa v3.1
Defline:  (1 of 1) KOG0933//KOG0978 - Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) // E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  1468
Name:  ? Potri.012G141200 Secondary Identifier:  ? PAC:37282631
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G141200 0.5kb upstream 0.5kb upstream 5878 true Chr12: 15472955-15478832 Populus trichocarpa
Potri.012G141200 0.5kb upstream 0.5kb upstream 500 false Chr12: 15472955-15473454 Populus trichocarpa
Potri.012G141200 0.5kb downstream 0.5kb downstream 5878 true Chr12: 15473455-15479332 Populus trichocarpa
Potri.012G141200 0.5kb downstream 0.5kb downstream 500 false Chr12: 15478833-15479332 Populus trichocarpa
Potri.012G141200 1.0kb upstream 1.0kb upstream 6378 true Chr12: 15472455-15478832 Populus trichocarpa
Potri.012G141200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 15472455-15473454 Populus trichocarpa
Potri.012G141200 1.0kb downstream 1.0kb downstream 6378 true Chr12: 15473455-15479832 Populus trichocarpa
Potri.012G141200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 15478833-15479832 Populus trichocarpa
Potri.012G141200 2.0kb upstream 2.0kb upstream 7378 true Chr12: 15471455-15478832 Populus trichocarpa
Potri.012G141200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 15471455-15473454 Populus trichocarpa
Potri.012G141200 2.0kb downstream 2.0kb downstream 7378 true Chr12: 15473455-15480832 Populus trichocarpa
Potri.012G141200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 15478833-15480832 Populus trichocarpa
Potri.012G141200 5.0kb upstream 5.0kb upstream 10378 true Chr12: 15468455-15478832 Populus trichocarpa
Potri.012G141200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 15468455-15473454 Populus trichocarpa
Potri.012G141200 5.0kb downstream 5.0kb downstream 10378 true Chr12: 15473455-15483832 Populus trichocarpa
Potri.012G141200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 15478833-15483832 Populus trichocarpa
Potri.012G141200 10.0kb upstream 10.0kb upstream 15378 true Chr12: 15463455-15478832 Populus trichocarpa
Potri.012G141200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 15463455-15473454 Populus trichocarpa
Potri.012G141200 10.0kb downstream 10.0kb downstream 15378 true Chr12: 15473455-15488832 Populus trichocarpa
Potri.012G141200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 15478833-15488832 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122400132 5262 Malpighiales View MSA
124196801 5268 Malvidae View MSA
124073643 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain