Gene : Potri.012G140200 P. trichocarpa v3.1
Defline:  (1 of 4) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Genomic Order:  1459
Name:  ? Potri.012G140200 Secondary Identifier:  ? PAC:37280744
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G140200 0.5kb upstream 0.5kb upstream 2233 true Chr12: 15424328-15426560 Populus trichocarpa
Potri.012G140200 0.5kb upstream 0.5kb upstream 500 false Chr12: 15424328-15424827 Populus trichocarpa
Potri.012G140200 0.5kb downstream 0.5kb downstream 2233 true Chr12: 15424828-15427060 Populus trichocarpa
Potri.012G140200 0.5kb downstream 0.5kb downstream 500 false Chr12: 15426561-15427060 Populus trichocarpa
Potri.012G140200 1.0kb upstream 1.0kb upstream 2733 true Chr12: 15423828-15426560 Populus trichocarpa
Potri.012G140200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 15423828-15424827 Populus trichocarpa
Potri.012G140200 1.0kb downstream 1.0kb downstream 2733 true Chr12: 15424828-15427560 Populus trichocarpa
Potri.012G140200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 15426561-15427560 Populus trichocarpa
Potri.012G140200 2.0kb upstream 2.0kb upstream 3733 true Chr12: 15422828-15426560 Populus trichocarpa
Potri.012G140200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 15422828-15424827 Populus trichocarpa
Potri.012G140200 2.0kb downstream 2.0kb downstream 3733 true Chr12: 15424828-15428560 Populus trichocarpa
Potri.012G140200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 15426561-15428560 Populus trichocarpa
Potri.012G140200 5.0kb upstream 5.0kb upstream 6733 true Chr12: 15419828-15426560 Populus trichocarpa
Potri.012G140200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 15419828-15424827 Populus trichocarpa
Potri.012G140200 5.0kb downstream 5.0kb downstream 6733 true Chr12: 15424828-15431560 Populus trichocarpa
Potri.012G140200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 15426561-15431560 Populus trichocarpa
Potri.012G140200 10.0kb upstream 10.0kb upstream 11733 true Chr12: 15414828-15426560 Populus trichocarpa
Potri.012G140200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 15414828-15424827 Populus trichocarpa
Potri.012G140200 10.0kb downstream 10.0kb downstream 11733 true Chr12: 15424828-15436560 Populus trichocarpa
Potri.012G140200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 15426561-15436560 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464340 5262 Malpighiales View MSA
124249786 5268 Malvidae View MSA
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain