Gene : Potri.013G033200 P. trichocarpa v3.1
Defline:  (1 of 3) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  335
Name:  ? Potri.013G033200 Secondary Identifier:  ? PAC:37233509
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G033200 0.5kb upstream 0.5kb upstream 1870 true Chr13: 2197058-2198927 Populus trichocarpa
Potri.013G033200 0.5kb upstream 0.5kb upstream 500 false Chr13: 2198428-2198927 Populus trichocarpa
Potri.013G033200 0.5kb downstream 0.5kb downstream 1870 true Chr13: 2196558-2198427 Populus trichocarpa
Potri.013G033200 0.5kb downstream 0.5kb downstream 500 false Chr13: 2196558-2197057 Populus trichocarpa
Potri.013G033200 1.0kb upstream 1.0kb upstream 2370 true Chr13: 2197058-2199427 Populus trichocarpa
Potri.013G033200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2198428-2199427 Populus trichocarpa
Potri.013G033200 1.0kb downstream 1.0kb downstream 2370 true Chr13: 2196058-2198427 Populus trichocarpa
Potri.013G033200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2196058-2197057 Populus trichocarpa
Potri.013G033200 2.0kb upstream 2.0kb upstream 3370 true Chr13: 2197058-2200427 Populus trichocarpa
Potri.013G033200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2198428-2200427 Populus trichocarpa
Potri.013G033200 2.0kb downstream 2.0kb downstream 3370 true Chr13: 2195058-2198427 Populus trichocarpa
Potri.013G033200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2195058-2197057 Populus trichocarpa
Potri.013G033200 5.0kb upstream 5.0kb upstream 6370 true Chr13: 2197058-2203427 Populus trichocarpa
Potri.013G033200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2198428-2203427 Populus trichocarpa
Potri.013G033200 5.0kb downstream 5.0kb downstream 6370 true Chr13: 2192058-2198427 Populus trichocarpa
Potri.013G033200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2192058-2197057 Populus trichocarpa
Potri.013G033200 10.0kb upstream 10.0kb upstream 11370 true Chr13: 2197058-2208427 Populus trichocarpa
Potri.013G033200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2198428-2208427 Populus trichocarpa
Potri.013G033200 10.0kb downstream 10.0kb downstream 11370 true Chr13: 2187058-2198427 Populus trichocarpa
Potri.013G033200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2187058-2197057 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122464895 5262 Malpighiales View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain