Gene : Potri.013G137300 P. trichocarpa v3.1

Defline:  (1 of 4) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  1403
Name:  ? Potri.013G137300 Secondary Identifier:  ? PAC:37234530

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G137300 0.5kb upstream 0.5kb upstream 2295 true Chr13: 14683663-14685957 Populus trichocarpa
Potri.013G137300 0.5kb upstream 0.5kb upstream 500 false Chr13: 14685458-14685957 Populus trichocarpa
Potri.013G137300 0.5kb downstream 0.5kb downstream 2295 true Chr13: 14683163-14685457 Populus trichocarpa
Potri.013G137300 0.5kb downstream 0.5kb downstream 500 false Chr13: 14683163-14683662 Populus trichocarpa
Potri.013G137300 1.0kb upstream 1.0kb upstream 2795 true Chr13: 14683663-14686457 Populus trichocarpa
Potri.013G137300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14685458-14686457 Populus trichocarpa
Potri.013G137300 1.0kb downstream 1.0kb downstream 2795 true Chr13: 14682663-14685457 Populus trichocarpa
Potri.013G137300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14682663-14683662 Populus trichocarpa
Potri.013G137300 2.0kb upstream 2.0kb upstream 3795 true Chr13: 14683663-14687457 Populus trichocarpa
Potri.013G137300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14685458-14687457 Populus trichocarpa
Potri.013G137300 2.0kb downstream 2.0kb downstream 3795 true Chr13: 14681663-14685457 Populus trichocarpa
Potri.013G137300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14681663-14683662 Populus trichocarpa
Potri.013G137300 5.0kb upstream 5.0kb upstream 6795 true Chr13: 14683663-14690457 Populus trichocarpa
Potri.013G137300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14685458-14690457 Populus trichocarpa
Potri.013G137300 5.0kb downstream 5.0kb downstream 6795 true Chr13: 14678663-14685457 Populus trichocarpa
Potri.013G137300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14678663-14683662 Populus trichocarpa
Potri.013G137300 10.0kb upstream 10.0kb upstream 11795 true Chr13: 14683663-14695457 Populus trichocarpa
Potri.013G137300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14685458-14695457 Populus trichocarpa
Potri.013G137300 10.0kb downstream 10.0kb downstream 11795 true Chr13: 14673663-14685457 Populus trichocarpa
Potri.013G137300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14673663-14683662 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464908 5262 Malpighiales View MSA
124254317 5268 Malvidae View MSA
124051319 5270 Rosid View MSA
123751133 5271 Pentapetalae View MSA
122795753 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain