Gene : Potri.014G156800 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  1630
Name:  ? Potri.014G156800 Secondary Identifier:  ? PAC:37267617
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CAROTENOID-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5943 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5947 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G156800 0.5kb upstream 0.5kb upstream 9834   true Chr14: 12221985-12231818 Populus trichocarpa
Potri.014G156800 0.5kb upstream 0.5kb upstream 500   false Chr14: 12231319-12231818 Populus trichocarpa
Potri.014G156800 0.5kb downstream 0.5kb downstream 9834   true Chr14: 12221485-12231318 Populus trichocarpa
Potri.014G156800 0.5kb downstream 0.5kb downstream 500   false Chr14: 12221485-12221984 Populus trichocarpa
Potri.014G156800 1.0kb upstream 1.0kb upstream 10334   true Chr14: 12221985-12232318 Populus trichocarpa
Potri.014G156800 1.0kb upstream 1.0kb upstream 1000   false Chr14: 12231319-12232318 Populus trichocarpa
Potri.014G156800 1.0kb downstream 1.0kb downstream 10334   true Chr14: 12220985-12231318 Populus trichocarpa
Potri.014G156800 1.0kb downstream 1.0kb downstream 1000   false Chr14: 12220985-12221984 Populus trichocarpa
Potri.014G156800 2.0kb upstream 2.0kb upstream 11334   true Chr14: 12221985-12233318 Populus trichocarpa
Potri.014G156800 2.0kb upstream 2.0kb upstream 2000   false Chr14: 12231319-12233318 Populus trichocarpa
Potri.014G156800 2.0kb downstream 2.0kb downstream 11334   true Chr14: 12219985-12231318 Populus trichocarpa
Potri.014G156800 2.0kb downstream 2.0kb downstream 2000   false Chr14: 12219985-12221984 Populus trichocarpa
Potri.014G156800 5.0kb upstream 5.0kb upstream 14334   true Chr14: 12221985-12236318 Populus trichocarpa
Potri.014G156800 5.0kb upstream 5.0kb upstream 5000   false Chr14: 12231319-12236318 Populus trichocarpa
Potri.014G156800 5.0kb downstream 5.0kb downstream 14334   true Chr14: 12216985-12231318 Populus trichocarpa
Potri.014G156800 5.0kb downstream 5.0kb downstream 5000   false Chr14: 12216985-12221984 Populus trichocarpa
Potri.014G156800 10.0kb upstream 10.0kb upstream 19334   true Chr14: 12221985-12241318 Populus trichocarpa
Potri.014G156800 10.0kb upstream 10.0kb upstream 10000   false Chr14: 12231319-12241318 Populus trichocarpa
Potri.014G156800 10.0kb downstream 10.0kb downstream 19334   true Chr14: 12211985-12231318 Populus trichocarpa
Potri.014G156800 10.0kb downstream 10.0kb downstream 10000   false Chr14: 12211985-12221984 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457322 5262 Malpighiales View MSA
124238742 5268 Malvidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain