Gene : Potri.015G028300 P. trichocarpa v3.1

Defline:  (1 of 3) K07151 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase (STT3) Genomic Order:  290
Name:  ? Potri.015G028300 Secondary Identifier:  ? PAC:37255112

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G028300 0.5kb upstream 0.5kb upstream 7242 true Chr15: 2269858-2277099 Populus trichocarpa
Potri.015G028300 0.5kb upstream 0.5kb upstream 500 false Chr15: 2269858-2270357 Populus trichocarpa
Potri.015G028300 0.5kb downstream 0.5kb downstream 7242 true Chr15: 2270358-2277599 Populus trichocarpa
Potri.015G028300 0.5kb downstream 0.5kb downstream 500 false Chr15: 2277100-2277599 Populus trichocarpa
Potri.015G028300 1.0kb upstream 1.0kb upstream 7742 true Chr15: 2269358-2277099 Populus trichocarpa
Potri.015G028300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2269358-2270357 Populus trichocarpa
Potri.015G028300 1.0kb downstream 1.0kb downstream 7742 true Chr15: 2270358-2278099 Populus trichocarpa
Potri.015G028300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2277100-2278099 Populus trichocarpa
Potri.015G028300 2.0kb upstream 2.0kb upstream 8742 true Chr15: 2268358-2277099 Populus trichocarpa
Potri.015G028300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2268358-2270357 Populus trichocarpa
Potri.015G028300 2.0kb downstream 2.0kb downstream 8742 true Chr15: 2270358-2279099 Populus trichocarpa
Potri.015G028300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2277100-2279099 Populus trichocarpa
Potri.015G028300 5.0kb upstream 5.0kb upstream 11742 true Chr15: 2265358-2277099 Populus trichocarpa
Potri.015G028300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2265358-2270357 Populus trichocarpa
Potri.015G028300 5.0kb downstream 5.0kb downstream 11742 true Chr15: 2270358-2282099 Populus trichocarpa
Potri.015G028300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2277100-2282099 Populus trichocarpa
Potri.015G028300 10.0kb upstream 10.0kb upstream 16742 true Chr15: 2260358-2277099 Populus trichocarpa
Potri.015G028300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2260358-2270357 Populus trichocarpa
Potri.015G028300 10.0kb downstream 10.0kb downstream 16742 true Chr15: 2270358-2287099 Populus trichocarpa
Potri.015G028300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2277100-2287099 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411091 5262 Malpighiales View MSA
124250175 5268 Malvidae View MSA
124065943 5270 Rosid View MSA
123746907 5271 Pentapetalae View MSA
122791505 5272 Eudicot View MSA
122045472 5273 Angiosperm View MSA
121344925 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain