Gene : Potri.016G005200 P. trichocarpa v3.1

Defline:  (1 of 14) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  57
Name:  ? Potri.016G005200 Secondary Identifier:  ? PAC:37248995

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G005200 0.5kb upstream 0.5kb upstream 2391 true Chr16: 244576-246966 Populus trichocarpa
Potri.016G005200 0.5kb upstream 0.5kb upstream 500 false Chr16: 246467-246966 Populus trichocarpa
Potri.016G005200 0.5kb downstream 0.5kb downstream 2391 true Chr16: 244076-246466 Populus trichocarpa
Potri.016G005200 0.5kb downstream 0.5kb downstream 500 false Chr16: 244076-244575 Populus trichocarpa
Potri.016G005200 1.0kb upstream 1.0kb upstream 2891 true Chr16: 244576-247466 Populus trichocarpa
Potri.016G005200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 246467-247466 Populus trichocarpa
Potri.016G005200 1.0kb downstream 1.0kb downstream 2891 true Chr16: 243576-246466 Populus trichocarpa
Potri.016G005200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 243576-244575 Populus trichocarpa
Potri.016G005200 2.0kb upstream 2.0kb upstream 3891 true Chr16: 244576-248466 Populus trichocarpa
Potri.016G005200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 246467-248466 Populus trichocarpa
Potri.016G005200 2.0kb downstream 2.0kb downstream 3891 true Chr16: 242576-246466 Populus trichocarpa
Potri.016G005200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 242576-244575 Populus trichocarpa
Potri.016G005200 5.0kb upstream 5.0kb upstream 6891 true Chr16: 244576-251466 Populus trichocarpa
Potri.016G005200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 246467-251466 Populus trichocarpa
Potri.016G005200 5.0kb downstream 5.0kb downstream 6891 true Chr16: 239576-246466 Populus trichocarpa
Potri.016G005200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 239576-244575 Populus trichocarpa
Potri.016G005200 10.0kb upstream 10.0kb upstream 11891 true Chr16: 244576-256466 Populus trichocarpa
Potri.016G005200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 246467-256466 Populus trichocarpa
Potri.016G005200 10.0kb downstream 10.0kb downstream 11891 true Chr16: 234576-246466 Populus trichocarpa
Potri.016G005200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 234576-244575 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
122461209 5262 Malpighiales View MSA
124237306 5268 Malvidae View MSA
124050263 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain