Gene : Potri.015G132100 P. trichocarpa v3.1

Defline:  (1 of 3) K14270 - aminotransferase (ACS10_12) Genomic Order:  1355
Name:  ? Potri.015G132100 Secondary Identifier:  ? PAC:37254752

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ASPARTATE-DEG1-PWY Populus trichocarpa pathologic  
Ptrichocarpa ASPARTATESYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7117 Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G132100 0.5kb upstream 0.5kb upstream 3179 true Chr15: 14250039-14253217 Populus trichocarpa
Potri.015G132100 0.5kb upstream 0.5kb upstream 500 false Chr15: 14252718-14253217 Populus trichocarpa
Potri.015G132100 0.5kb downstream 0.5kb downstream 3179 true Chr15: 14249539-14252717 Populus trichocarpa
Potri.015G132100 0.5kb downstream 0.5kb downstream 500 false Chr15: 14249539-14250038 Populus trichocarpa
Potri.015G132100 1.0kb upstream 1.0kb upstream 3679 true Chr15: 14250039-14253717 Populus trichocarpa
Potri.015G132100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14252718-14253717 Populus trichocarpa
Potri.015G132100 1.0kb downstream 1.0kb downstream 3679 true Chr15: 14249039-14252717 Populus trichocarpa
Potri.015G132100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14249039-14250038 Populus trichocarpa
Potri.015G132100 2.0kb upstream 2.0kb upstream 4679 true Chr15: 14250039-14254717 Populus trichocarpa
Potri.015G132100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14252718-14254717 Populus trichocarpa
Potri.015G132100 2.0kb downstream 2.0kb downstream 4679 true Chr15: 14248039-14252717 Populus trichocarpa
Potri.015G132100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14248039-14250038 Populus trichocarpa
Potri.015G132100 5.0kb upstream 5.0kb upstream 7679 true Chr15: 14250039-14257717 Populus trichocarpa
Potri.015G132100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14252718-14257717 Populus trichocarpa
Potri.015G132100 5.0kb downstream 5.0kb downstream 7679 true Chr15: 14245039-14252717 Populus trichocarpa
Potri.015G132100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14245039-14250038 Populus trichocarpa
Potri.015G132100 10.0kb upstream 10.0kb upstream 12679 true Chr15: 14250039-14262717 Populus trichocarpa
Potri.015G132100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14252718-14262717 Populus trichocarpa
Potri.015G132100 10.0kb downstream 10.0kb downstream 12679 true Chr15: 14240039-14252717 Populus trichocarpa
Potri.015G132100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14240039-14250038 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457429 5262 Malpighiales View MSA
124236986 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain