Gene : Potri.015G110400 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  1133
Name:  ? Potri.015G110400 Secondary Identifier:  ? PAC:37255341
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa DETOX1-PWY Populus trichocarpa pathologic  
Ptrichocarpa DETOX1-PWY-1 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6854 Populus trichocarpa pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G110400 0.5kb upstream 0.5kb upstream 3132 true Chr15: 12681308-12684439 Populus trichocarpa
Potri.015G110400 0.5kb upstream 0.5kb upstream 500 false Chr15: 12683940-12684439 Populus trichocarpa
Potri.015G110400 0.5kb downstream 0.5kb downstream 3132 true Chr15: 12680808-12683939 Populus trichocarpa
Potri.015G110400 0.5kb downstream 0.5kb downstream 500 false Chr15: 12680808-12681307 Populus trichocarpa
Potri.015G110400 1.0kb upstream 1.0kb upstream 3632 true Chr15: 12681308-12684939 Populus trichocarpa
Potri.015G110400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12683940-12684939 Populus trichocarpa
Potri.015G110400 1.0kb downstream 1.0kb downstream 3632 true Chr15: 12680308-12683939 Populus trichocarpa
Potri.015G110400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12680308-12681307 Populus trichocarpa
Potri.015G110400 2.0kb upstream 2.0kb upstream 4632 true Chr15: 12681308-12685939 Populus trichocarpa
Potri.015G110400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12683940-12685939 Populus trichocarpa
Potri.015G110400 2.0kb downstream 2.0kb downstream 4632 true Chr15: 12679308-12683939 Populus trichocarpa
Potri.015G110400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12679308-12681307 Populus trichocarpa
Potri.015G110400 5.0kb upstream 5.0kb upstream 7632 true Chr15: 12681308-12688939 Populus trichocarpa
Potri.015G110400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12683940-12688939 Populus trichocarpa
Potri.015G110400 5.0kb downstream 5.0kb downstream 7632 true Chr15: 12676308-12683939 Populus trichocarpa
Potri.015G110400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12676308-12681307 Populus trichocarpa
Potri.015G110400 10.0kb upstream 10.0kb upstream 12632 true Chr15: 12681308-12693939 Populus trichocarpa
Potri.015G110400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12683940-12693939 Populus trichocarpa
Potri.015G110400 10.0kb downstream 10.0kb downstream 12632 true Chr15: 12671308-12683939 Populus trichocarpa
Potri.015G110400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12671308-12681307 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455993 5262 Malpighiales View MSA
124246967 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain