Gene : Potri.016G051300 P. trichocarpa v3.1
Defline:  (1 of 19) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  528
Name:  ? Potri.016G051300 Secondary Identifier:  ? PAC:37249840
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G051300 0.5kb upstream 0.5kb upstream 4339 true Chr16: 3275467-3279805 Populus trichocarpa
Potri.016G051300 0.5kb upstream 0.5kb upstream 500 false Chr16: 3275467-3275966 Populus trichocarpa
Potri.016G051300 0.5kb downstream 0.5kb downstream 4339 true Chr16: 3275967-3280305 Populus trichocarpa
Potri.016G051300 0.5kb downstream 0.5kb downstream 500 false Chr16: 3279806-3280305 Populus trichocarpa
Potri.016G051300 1.0kb upstream 1.0kb upstream 4839 true Chr16: 3274967-3279805 Populus trichocarpa
Potri.016G051300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3274967-3275966 Populus trichocarpa
Potri.016G051300 1.0kb downstream 1.0kb downstream 4839 true Chr16: 3275967-3280805 Populus trichocarpa
Potri.016G051300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3279806-3280805 Populus trichocarpa
Potri.016G051300 2.0kb upstream 2.0kb upstream 5839 true Chr16: 3273967-3279805 Populus trichocarpa
Potri.016G051300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3273967-3275966 Populus trichocarpa
Potri.016G051300 2.0kb downstream 2.0kb downstream 5839 true Chr16: 3275967-3281805 Populus trichocarpa
Potri.016G051300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3279806-3281805 Populus trichocarpa
Potri.016G051300 5.0kb upstream 5.0kb upstream 8839 true Chr16: 3270967-3279805 Populus trichocarpa
Potri.016G051300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3270967-3275966 Populus trichocarpa
Potri.016G051300 5.0kb downstream 5.0kb downstream 8839 true Chr16: 3275967-3284805 Populus trichocarpa
Potri.016G051300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3279806-3284805 Populus trichocarpa
Potri.016G051300 10.0kb upstream 10.0kb upstream 13839 true Chr16: 3265967-3279805 Populus trichocarpa
Potri.016G051300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3265967-3275966 Populus trichocarpa
Potri.016G051300 10.0kb downstream 10.0kb downstream 13839 true Chr16: 3275967-3289805 Populus trichocarpa
Potri.016G051300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3279806-3289805 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
122453302 5262 Malpighiales View MSA
124241472 5268 Malvidae View MSA
124074788 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain