Gene : Potri.019G027900 P. trichocarpa v3.1

Defline:  (1 of 20) PTHR19376 - DNA-DIRECTED RNA POLYMERASE Genomic Order:  290
Name:  ? Potri.019G027900 Secondary Identifier:  ? PAC:37260182

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G027900 0.5kb upstream 0.5kb upstream 938 true Chr19: 3190339-3191276 Populus trichocarpa
Potri.019G027900 0.5kb upstream 0.5kb upstream 500 false Chr19: 3190339-3190838 Populus trichocarpa
Potri.019G027900 0.5kb downstream 0.5kb downstream 938 true Chr19: 3190839-3191776 Populus trichocarpa
Potri.019G027900 0.5kb downstream 0.5kb downstream 500 false Chr19: 3191277-3191776 Populus trichocarpa
Potri.019G027900 1.0kb upstream 1.0kb upstream 1438 true Chr19: 3189839-3191276 Populus trichocarpa
Potri.019G027900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3189839-3190838 Populus trichocarpa
Potri.019G027900 1.0kb downstream 1.0kb downstream 1438 true Chr19: 3190839-3192276 Populus trichocarpa
Potri.019G027900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3191277-3192276 Populus trichocarpa
Potri.019G027900 2.0kb upstream 2.0kb upstream 2438 true Chr19: 3188839-3191276 Populus trichocarpa
Potri.019G027900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3188839-3190838 Populus trichocarpa
Potri.019G027900 2.0kb downstream 2.0kb downstream 2438 true Chr19: 3190839-3193276 Populus trichocarpa
Potri.019G027900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3191277-3193276 Populus trichocarpa
Potri.019G027900 5.0kb upstream 5.0kb upstream 5438 true Chr19: 3185839-3191276 Populus trichocarpa
Potri.019G027900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3185839-3190838 Populus trichocarpa
Potri.019G027900 5.0kb downstream 5.0kb downstream 5438 true Chr19: 3190839-3196276 Populus trichocarpa
Potri.019G027900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3191277-3196276 Populus trichocarpa
Potri.019G027900 10.0kb upstream 10.0kb upstream 10438 true Chr19: 3180839-3191276 Populus trichocarpa
Potri.019G027900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3180839-3190838 Populus trichocarpa
Potri.019G027900 10.0kb downstream 10.0kb downstream 10438 true Chr19: 3190839-3201276 Populus trichocarpa
Potri.019G027900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3191277-3201276 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448383 5262 Malpighiales View MSA
124235916 5268 Malvidae View MSA
123951458 5270 Rosid View MSA
123750020 5271 Pentapetalae View MSA
122797399 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain