Gene : Potri.019G029400 P. trichocarpa v3.1

Defline:  (1 of 1) K13156 - U11/U12 small nuclear ribonucleoprotein 48 kDa protein (SNRNP48) Genomic Order:  306
Name:  ? Potri.019G029400 Secondary Identifier:  ? PAC:37260325

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G029400 0.5kb upstream 0.5kb upstream 6251 true Chr19: 3293544-3299794 Populus trichocarpa
Potri.019G029400 0.5kb upstream 0.5kb upstream 500 false Chr19: 3293544-3294043 Populus trichocarpa
Potri.019G029400 0.5kb downstream 0.5kb downstream 6251 true Chr19: 3294044-3300294 Populus trichocarpa
Potri.019G029400 0.5kb downstream 0.5kb downstream 500 false Chr19: 3299795-3300294 Populus trichocarpa
Potri.019G029400 1.0kb upstream 1.0kb upstream 6751 true Chr19: 3293044-3299794 Populus trichocarpa
Potri.019G029400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3293044-3294043 Populus trichocarpa
Potri.019G029400 1.0kb downstream 1.0kb downstream 6751 true Chr19: 3294044-3300794 Populus trichocarpa
Potri.019G029400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3299795-3300794 Populus trichocarpa
Potri.019G029400 2.0kb upstream 2.0kb upstream 7751 true Chr19: 3292044-3299794 Populus trichocarpa
Potri.019G029400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3292044-3294043 Populus trichocarpa
Potri.019G029400 2.0kb downstream 2.0kb downstream 7751 true Chr19: 3294044-3301794 Populus trichocarpa
Potri.019G029400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3299795-3301794 Populus trichocarpa
Potri.019G029400 5.0kb upstream 5.0kb upstream 10751 true Chr19: 3289044-3299794 Populus trichocarpa
Potri.019G029400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3289044-3294043 Populus trichocarpa
Potri.019G029400 5.0kb downstream 5.0kb downstream 10751 true Chr19: 3294044-3304794 Populus trichocarpa
Potri.019G029400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3299795-3304794 Populus trichocarpa
Potri.019G029400 10.0kb upstream 10.0kb upstream 15751 true Chr19: 3284044-3299794 Populus trichocarpa
Potri.019G029400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3284044-3294043 Populus trichocarpa
Potri.019G029400 10.0kb downstream 10.0kb downstream 15751 true Chr19: 3294044-3309794 Populus trichocarpa
Potri.019G029400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3299795-3309794 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458543 5262 Malpighiales View MSA
124239890 5268 Malvidae View MSA
124063423 5270 Rosid View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain