Gene : Potri.019G018300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR33372//PTHR33372:SF1 - FAMILY NOT NAMED // CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  190
Name:  ? Potri.019G018300 Secondary Identifier:  ? PAC:37260673

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G018300 0.5kb upstream 0.5kb upstream 6020 true Chr19: 2138032-2144051 Populus trichocarpa
Potri.019G018300 0.5kb upstream 0.5kb upstream 500 false Chr19: 2138032-2138531 Populus trichocarpa
Potri.019G018300 0.5kb downstream 0.5kb downstream 6020 true Chr19: 2138532-2144551 Populus trichocarpa
Potri.019G018300 0.5kb downstream 0.5kb downstream 500 false Chr19: 2144052-2144551 Populus trichocarpa
Potri.019G018300 1.0kb upstream 1.0kb upstream 6520 true Chr19: 2137532-2144051 Populus trichocarpa
Potri.019G018300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2137532-2138531 Populus trichocarpa
Potri.019G018300 1.0kb downstream 1.0kb downstream 6520 true Chr19: 2138532-2145051 Populus trichocarpa
Potri.019G018300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2144052-2145051 Populus trichocarpa
Potri.019G018300 2.0kb upstream 2.0kb upstream 7520 true Chr19: 2136532-2144051 Populus trichocarpa
Potri.019G018300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2136532-2138531 Populus trichocarpa
Potri.019G018300 2.0kb downstream 2.0kb downstream 7520 true Chr19: 2138532-2146051 Populus trichocarpa
Potri.019G018300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2144052-2146051 Populus trichocarpa
Potri.019G018300 5.0kb upstream 5.0kb upstream 10520 true Chr19: 2133532-2144051 Populus trichocarpa
Potri.019G018300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2133532-2138531 Populus trichocarpa
Potri.019G018300 5.0kb downstream 5.0kb downstream 10520 true Chr19: 2138532-2149051 Populus trichocarpa
Potri.019G018300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2144052-2149051 Populus trichocarpa
Potri.019G018300 10.0kb upstream 10.0kb upstream 15520 true Chr19: 2128532-2144051 Populus trichocarpa
Potri.019G018300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2128532-2138531 Populus trichocarpa
Potri.019G018300 10.0kb downstream 10.0kb downstream 15520 true Chr19: 2138532-2154051 Populus trichocarpa
Potri.019G018300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2144052-2154051 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457484 5262 Malpighiales View MSA
124244811 5268 Malvidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain