Gene : Potri.T178300 P. trichocarpa v3.1
Defline:  (1 of 13) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  2
Name:  ? Potri.T178300 Secondary Identifier:  ? PAC:37260137
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-361 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6040 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T178300 0.5kb upstream 0.5kb upstream 2155 true scaffold_1739: 1750-3904 Populus trichocarpa
Potri.T178300 0.5kb upstream 0.5kb upstream 500 false scaffold_1739: 1750-2249 Populus trichocarpa
Potri.T178300 0.5kb downstream 0.5kb downstream 2155 true scaffold_1739: 2250-4404 Populus trichocarpa
Potri.T178300 0.5kb downstream 0.5kb downstream 500 false scaffold_1739: 3905-4404 Populus trichocarpa
Potri.T178300 1.0kb upstream 1.0kb upstream 2655 true scaffold_1739: 1250-3904 Populus trichocarpa
Potri.T178300 1.0kb upstream 1.0kb upstream 1000 false scaffold_1739: 1250-2249 Populus trichocarpa
Potri.T178300 1.0kb downstream 1.0kb downstream 2655 true scaffold_1739: 2250-4904 Populus trichocarpa
Potri.T178300 1.0kb downstream 1.0kb downstream 1000 false scaffold_1739: 3905-4904 Populus trichocarpa
Potri.T178300 2.0kb upstream 2.0kb upstream 3655 true scaffold_1739: 250-3904 Populus trichocarpa
Potri.T178300 2.0kb upstream 2.0kb upstream 2000 false scaffold_1739: 250-2249 Populus trichocarpa
Potri.T178300 2.0kb downstream 2.0kb downstream 3655 true scaffold_1739: 2250-5904 Populus trichocarpa
Potri.T178300 2.0kb downstream 2.0kb downstream 2000 false scaffold_1739: 3905-5904 Populus trichocarpa
Potri.T178300 5.0kb upstream 5.0kb upstream 3904 true scaffold_1739: 1-3904 Populus trichocarpa
Potri.T178300 5.0kb upstream 5.0kb upstream 2249 false scaffold_1739: 1-2249 Populus trichocarpa
Potri.T178300 5.0kb downstream 5.0kb downstream 4778 true scaffold_1739: 2250-7027 Populus trichocarpa
Potri.T178300 5.0kb downstream 5.0kb downstream 3123 false scaffold_1739: 3905-7027 Populus trichocarpa
Potri.T178300 10.0kb upstream 10.0kb upstream 3904 true scaffold_1739: 1-3904 Populus trichocarpa
Potri.T178300 10.0kb upstream 10.0kb upstream 2249 false scaffold_1739: 1-2249 Populus trichocarpa
Potri.T178300 10.0kb downstream 10.0kb downstream 4778 true scaffold_1739: 2250-7027 Populus trichocarpa
Potri.T178300 10.0kb downstream 10.0kb downstream 3123 false scaffold_1739: 3905-7027 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449254 5262 Malpighiales View MSA
124254754 5268 Malvidae View MSA
124071294 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain