Gene : Potri.019G090100 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR12411//PTHR12411:SF339 - CYSTEINE PROTEASE FAMILY C1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  927
Name:  ? Potri.019G090100 Secondary Identifier:  ? PAC:37262009
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G090100 0.5kb upstream 0.5kb upstream 1265 true Chr19: 12141182-12142446 Populus trichocarpa
Potri.019G090100 0.5kb upstream 0.5kb upstream 500 false Chr19: 12141182-12141681 Populus trichocarpa
Potri.019G090100 0.5kb downstream 0.5kb downstream 1265 true Chr19: 12141682-12142946 Populus trichocarpa
Potri.019G090100 0.5kb downstream 0.5kb downstream 500 false Chr19: 12142447-12142946 Populus trichocarpa
Potri.019G090100 1.0kb upstream 1.0kb upstream 1765 true Chr19: 12140682-12142446 Populus trichocarpa
Potri.019G090100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 12140682-12141681 Populus trichocarpa
Potri.019G090100 1.0kb downstream 1.0kb downstream 1765 true Chr19: 12141682-12143446 Populus trichocarpa
Potri.019G090100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 12142447-12143446 Populus trichocarpa
Potri.019G090100 2.0kb upstream 2.0kb upstream 2765 true Chr19: 12139682-12142446 Populus trichocarpa
Potri.019G090100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 12139682-12141681 Populus trichocarpa
Potri.019G090100 2.0kb downstream 2.0kb downstream 2765 true Chr19: 12141682-12144446 Populus trichocarpa
Potri.019G090100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 12142447-12144446 Populus trichocarpa
Potri.019G090100 5.0kb upstream 5.0kb upstream 5765 true Chr19: 12136682-12142446 Populus trichocarpa
Potri.019G090100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 12136682-12141681 Populus trichocarpa
Potri.019G090100 5.0kb downstream 5.0kb downstream 5765 true Chr19: 12141682-12147446 Populus trichocarpa
Potri.019G090100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 12142447-12147446 Populus trichocarpa
Potri.019G090100 10.0kb upstream 10.0kb upstream 10765 true Chr19: 12131682-12142446 Populus trichocarpa
Potri.019G090100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 12131682-12141681 Populus trichocarpa
Potri.019G090100 10.0kb downstream 10.0kb downstream 10765 true Chr19: 12141682-12152446 Populus trichocarpa
Potri.019G090100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 12142447-12152446 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
122449581 5262 Malpighiales View MSA
124254751 5268 Malvidae View MSA
124051561 5270 Rosid View MSA
123753893 5271 Pentapetalae View MSA
122775321 5272 Eudicot View MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain